Clostridium sp. MD294: C820_000960
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Entry
C820_000960 CDS
T10174
Symbol
ssb
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
clod Clostridium sp. MD294
Pathway
clod03030
DNA replication
clod03430
Mismatch repair
clod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C820_000960 (ssb)
03430 Mismatch repair
C820_000960 (ssb)
03440 Homologous recombination
C820_000960 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clod03032
]
C820_000960 (ssb)
03400 DNA repair and recombination proteins [BR:
clod03400
]
C820_000960 (ssb)
03029 Mitochondrial biogenesis [BR:
clod03029
]
C820_000960 (ssb)
DNA replication proteins [BR:
clod03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
C820_000960 (ssb)
DNA repair and recombination proteins [BR:
clod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
C820_000960 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
C820_000960 (ssb)
Mitochondrial biogenesis [BR:
clod03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
C820_000960 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
RecJ_OB
UBA_3
SSB_1
Motif
Other DBs
NCBI-ProteinID:
USF29560
UniProt:
N1Z7J0
LinkDB
All DBs
Position
complement(979650..980126)
Genome browser
AA seq
158 aa
AA seq
DB search
MNKVILMGRLTQSPEVRYTQAAEPLAVARYTLAVNKRFKRQGEADADFINCVSFGKAAEF
AEKYFKKGQMVSVIGRLQVRSWDDQNGQKRWTTEVVIEEQYFAESKTSFESRAAANTNMG
TAAPSPAPAKPAYQPTSNVEDGFYPIDESIEDDDDLPF
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagtaattttaatgggcagattgacacaaagtccagaagtaaggtatacacaa
gctgctgaacctctggctgttgctcgatatacattagcagtaaataaaagatttaaacgt
caaggtgaagctgatgcagactttatcaactgtgtttcttttggaaaagcagcagagttt
gcagaaaagtatttcaaaaaaggtcaaatggtcagtgttattggcagacttcaagtgcgt
tcttgggacgaccaaaatggtcaaaaacgttggactactgaggttgtaatagaggagcaa
tattttgcagaaagcaaaacttcatttgaaagtcgtgcagctgcaaatacaaatatgggt
acagcagcaccatctcctgctcctgcaaaaccagcatatcagccaacatcaaacgtagaa
gatggtttttatcctattgatgaaagtattgaagacgatgacgatttacctttttaa
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