Clostridium sp. MD294: C820_001538
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Entry
C820_001538 CDS
T10174
Symbol
appA
Name
(GenBank) Oligopeptide-binding protein AppA
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
clod Clostridium sp. MD294
Pathway
clod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C820_001538 (appA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clod02000
]
C820_001538 (appA)
Transporters [BR:
clod02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
C820_001538 (appA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
MRI
DUF6491
FAM176
Presenilin
DDHD
Conotoxin
Piezo_TM1-24
PFF1_TM
FHIPEP
Motif
Other DBs
NCBI-ProteinID:
USF30097
UniProt:
N1ZBM5
LinkDB
All DBs
Position
complement(1557244..1558968)
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AA seq
574 aa
AA seq
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MKKLTLIYIALLFLLAGCTLQQTQQPQQEQLQTTQSEQSEQTQQSEQSEQTQQSEQSEQA
QQSQQSAQAQLSQKQLPLQEGGTLHLSMRNTTTLNPLLNQDASVDTILKLIYMPLIKLDK
NYKPSASIAQSWSFDEGGTVLSLNLRNDIYWQNGTNLTADDVIYSLDTLFRVADSNAVYK
NCTNYIRSYRKISNYDIEITFHQNFSGNLYALLFPIISSQYYGSNIANSDKNMLPMGNGY
FEFVHYTPAKEMRLKKCISSFGTTAHIDEISVNISTDKDTDLYSFEQGLTDILVMGSSDI
GKSDNDNEMKYYQYTTNYYDFIGFNFSKSLFQDSNVRKAIASITPKQAMLESIYLGHGIT
AQTPINTNYWFYEPDTVTYDFDIGQARDYLEASNWKDTNDDGILDRTTNELSETFRISIL
YNTENEIRKQVAIRIADELRGIGAEVSLDGQSYDNYIQKLQSGDFDLFVGGWQFSVVPNY
SFLLHSAQASLTNYPRYQNGDMDALLASAYSSVKDEDIKMAYSNLQKKIAEELPYISIVF
RDFVMLSSDRVQGQVKPLENNIFDNINEWYLYEQ
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaacacttatttatattgccttgctttttttattagcaggctgcacattg
caacaaacacaacagccacagcaagagcaattacaaacaacacagtcagagcagtcagag
caaacacaacagtcagagcagtcagagcaaacacaacagtcagagcaatcagaacaagca
cagcagtcacagcaatcagcacaagcacagctctcacaaaagcaattgcctttacaagag
ggtggaacacttcatttatctatgagaaacaccaccacattaaaccctcttttaaatcaa
gatgcttctgtagataccatattaaaattgatttatatgcctttgataaagcttgacaaa
aattacaagccttctgcttctattgctcagagctggagttttgatgaaggaggtactgta
ctttcattaaatttaagaaatgatatttattggcaaaatggcacaaatttaacagcagat
gacgtaatatactctcttgatacactttttagagtagcagacagcaatgctgtttataaa
aattgtactaactatattagaagttacagaaaaatatctaattatgatattgaaattaca
tttcatcaaaattttagtggcaatttatatgccctactttttcctattataagtagtcaa
tattatggcagcaatatcgcaaattctgataaaaatatgttgcctatgggaaatggatat
tttgaatttgtacattacactcctgcaaaagaaatgcgtttaaaaaaatgtattagtagt
tttggcacaacagcacacattgacgaaatttcagtaaatatcagtacagacaaagacaca
gatttatattcttttgaacaaggtcttacggatatattagtaatgggttcttctgatata
ggaaaatctgacaatgataatgaaatgaaatattatcaatatactactaattattatgat
tttattggatttaatttttctaaaagcctttttcaagacagcaatgtcagaaaagcaatt
gcaagcattactcctaaacaggctatgttagaaagcatttatttggggcatggtattaca
gcacagacacctatcaacaccaattactggttttatgaaccagatactgtcacatatgat
tttgacattgggcaagcaagagattatttggaagcttctaactggaaagataccaacgac
gacggcatacttgacagaacaacaaatgaactttctgaaacatttcgcatttctatatta
tacaatacagaaaatgaaatcagaaaacaagttgctatacgtatcgcagatgaattaaga
ggcattggtgcagaagtatctcttgacggacaaagttacgacaattatattcaaaaatta
caatctggcgattttgatttatttgtgggaggttggcaattttctgtagtgccaaattat
tcctttttgctacactctgctcaagcctctttaaccaattatccccgttatcaaaacggt
gatatggacgcactacttgcttctgcatacagcagtgtaaaagacgaagatattaaaatg
gcttacagcaatttacaaaagaaaatagcagaggaattgccttatatcagcattgttttt
cgtgattttgtaatgctttcctctgatagagtacaaggacaagtaaaacctttagaaaat
aatatttttgacaacataaatgaatggtatttgtatgagcaataa
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