Clostridium sp. MD294: C820_001604
Help
Entry
C820_001604 CDS
T10174
Symbol
ispH
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
clod Clostridium sp. MD294
Pathway
clod00900
Terpenoid backbone biosynthesis
clod01100
Metabolic pathways
clod01110
Biosynthesis of secondary metabolites
clod03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
C820_001604 (ispH)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
C820_001604 (ispH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
clod03011
]
C820_001604 (ispH)
Enzymes [BR:
clod01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
C820_001604 (ispH)
Ribosome [BR:
clod03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
C820_001604 (ispH)
Bacteria
C820_001604 (ispH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
USF30163
LinkDB
All DBs
Position
1626475..1628442
Genome browser
AA seq
655 aa
AA seq
DB search
MAEIIVAKSAGFCFGVSRAINMACDEINKNKNIYTYGPLIHNKEVIADLEKKGIHVIENL
EQVKQGTVMIRSHGVGQKVYDAIKQKGLQMIDGTCPFVKRIHDIVKQAYEQKKQIIIIGD
GKHPEVQGINGWCEYSAIILAEVEQTEQTQFCNNKNYTVVVQTTFRKNKFDAIIEILKQK
GLQLDIFDTICSATAERQQEAVALSKNVNKMIVIGDKSSSNTQKLFEICKKHCKKTYYIE
TICNLVLNIFDKNDKIGITAGASTPPAIIKEVIGTMSEALKDAVQNNGGSEEELTFEQML
EQSFVTLHTGDVVKGTVINISNEEVSVNLNYKSDGIIPKGEYSRDASIVPSKVLQPGDEI
EVFVVRVNDGDGNVLLSRKRIEDQKGMEEVEAAYQNKTIVTGKIVDVVRGGLIAMVNGVR
IFIPSSQVSNKFIEDLNVFKGKELEFNIIELDKVKRRFIGGRKALIEKEILEKKASIFEK
LEIGSKVKGKVSRITDFGAFVDLGGVDGLIHISEMSWGRITNPKEVLKEGQEIEVIILDV
DKEKGKISLSLKDSQSNPWTTAAEKYPVGSVTEGKVVRMVPFGAFVELEAGVDGLVHISQ
IANKHVEKPEDELKVGEMIKVKILEVNTEQKKISLSKRKAEENTEETPKEEEKAE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaattatagtggcaaaatcggcagggttttgttttggagtaagcagagcaatc
aatatggcttgtgatgaaatcaataaaaataaaaatatttatacttatggccctttgata
cataataaagaagtgatagcagatttagaaaaaaagggtatccatgtgattgaaaatttg
gaacaagtaaaacaaggcactgttatgatacgttctcatggtgtaggacaaaaagtgtat
gatgctatcaaacaaaagggattacaaatgatagatggcacctgtccctttgtaaaaaga
atacatgatattgtaaaacaagcatatgaacaaaaaaaacaaattattattataggagat
ggtaaacaccctgaagtacaaggcataaatggctggtgtgaatatagtgctattatatta
gcagaagtagaacaaacagaacaaacacaattttgtaacaataaaaattatactgtagta
gtacaaactacattccgaaaaaataaatttgatgctataatagaaatattaaaacaaaag
ggtttacaattagatatttttgatacaatatgttctgcaacagccgaaagacagcaagaa
gctgtagcattatctaaaaatgtaaacaaaatgatagtaataggggataaaagcagttct
aacacacaaaaattgtttgaaatttgcaaaaaacattgtaaaaaaacatattatattgaa
acaatttgtaatttggtgttgaatattttcgataagaatgataaaatagggataactgct
ggtgcatcaacaccgccagcaatcattaaggaggtaattggtacaatgagtgaagcatta
aaagatgcagtacaaaataacggaggaagtgaagaagaactaacatttgagcaaatgtta
gaacaatcttttgttacacttcatacaggagatgtagtaaaaggaactgtaatcaatatt
tcaaatgaggaagtttctgtaaacttaaattacaaatctgatggtattattccaaaggga
gaatatagtagagatgcaagtatagttccaagtaaagtattacaacctggagatgaaatt
gaagtatttgttgttcgtgtaaacgatggagatggcaatgttcttctttccagaaaacgt
atagaagaccaaaaaggtatggaagaagtagaagcagcttaccaaaacaaaacaatagta
acaggaaaaatagtagatgtggtaagaggcggcttaattgctatggtaaatggcgttaga
atatttattccatcttcacaggtttcaaataaatttattgaagacttaaatgtatttaaa
ggaaaagaattggaatttaatatcattgaattggataaagtaaaacgtcgttttataggt
ggcagaaaagcattgatagaaaaagaaatattagaaaagaaagcaagtatatttgaaaaa
ttggaaattggttctaaagtaaaaggaaaagtaagcagaattacagattttggagcattt
gttgatttaggcggagtagatggacttattcatatttcagaaatgtcttggggacgcatt
acaaatccaaaagaagtattaaaagaaggacaagaaatagaagttattatattagatgta
gataaagaaaaaggaaaaatttcactttctttaaaagacagccaaagcaatccttggaca
acagcagcagaaaaatatcctgtaggttctgttacagaaggaaaagtagtacgcatggta
ccatttggggcatttgtagaattagaagcaggtgttgacggattggttcacatttctcag
atagcaaataaacatgttgaaaaaccagaagatgaattaaaagtcggagaaatgattaaa
gtaaaaatattagaagtaaatacagaacagaaaaaaattagtttatcaaaaagaaaagca
gaagaaaatacagaagaaactccaaaggaagaagaaaaagcagaataa
DBGET
integrated database retrieval system
