Clostridium sp. MD294: C820_002000
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Entry
C820_002000 CDS
T10174
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
clod Clostridium sp. MD294
Pathway
clod00300
Lysine biosynthesis
clod00470
D-Amino acid metabolism
clod01100
Metabolic pathways
clod01110
Biosynthesis of secondary metabolites
clod01120
Microbial metabolism in diverse environments
clod01230
Biosynthesis of amino acids
Module
clod_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
C820_002000 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
C820_002000 (dapF)
Enzymes [BR:
clod01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
C820_002000 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
CntK_N
PrpF
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-ProteinID:
USF30559
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All DBs
Position
1970496..1971329
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AA seq
277 aa
AA seq
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MKFTKMEGCGNDYIYINCFEETVTNPQQLAITMSERHFGVGADGIVMIMPSEEADFRMRM
FNADGSEGEMCGNASRCVGKFVYDKGLTNKTNISLSTLAGIKYLQLHIKNGIVDTVTVDM
GEPIFEGKKIPTMSDREFVQKEVLSANDKTFEMTCVSMGNPHAVTYVENTDNFNVQKYGS
VLESNPFFPNKANIEFVQIIDDTHLKMRVWERGSGETMACGTGACATVVATAKNGICKRE
ADVILLGGTLHIQWNEQNNHIYMTGEARFCFDGVWLK
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttacaaaaatggaaggctgcggaaatgactatatttatattaactgttttgaa
gaaacagtaacaaatccacaacaattagcaataacaatgagtgaaagacattttggtgta
ggagcagatggcatagttatgataatgccaagtgaagaagctgattttagaatgagaatg
tttaatgctgatggctcagagggagaaatgtgtggtaatgccagtagatgcgttggaaaa
tttgtatacgacaaaggtttaacaaataaaacaaatatttctcttagtacattagcaggt
ataaaatatttacaattacatattaaaaatggtatagtagatacagttacggtagatatg
ggagagcctatatttgaagggaaaaaaatacctactatgagtgatagagaatttgtacaa
aaagaggtgttgtcagcaaatgataaaacatttgaaatgacctgtgtatctatgggaaat
cctcatgcagttacttatgtagaaaatacagacaattttaatgtacaaaaatatggaagt
gtattagaaagtaatccgttttttcctaataaagcaaatattgaatttgtacaaataata
gatgatacccatttaaaaatgagagtgtgggaaagaggttcaggagaaacaatggcttgc
ggaacaggcgcttgtgctacagttgtagcaacagcaaaaaatggtatctgtaaaagagaa
gctgatgtgatacttttaggtggtacattgcatattcaatggaatgagcaaaacaatcat
atttatatgacaggagaagcaagattttgttttgatggtgtatggctaaaataa
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