Clostridium sp. MD294: C820_002020
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Entry
C820_002020 CDS
T10174
Symbol
gyrB_2
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
clod Clostridium sp. MD294
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clod03032
]
C820_002020 (gyrB_2)
03400 DNA repair and recombination proteins [BR:
clod03400
]
C820_002020 (gyrB_2)
Enzymes [BR:
clod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C820_002020 (gyrB_2)
DNA replication proteins [BR:
clod03032
]
Prokaryotic type
DNA Topoisomerases
C820_002020 (gyrB_2)
DNA repair and recombination proteins [BR:
clod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C820_002020 (gyrB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Toprim_4
DUF3576
Motif
Other DBs
NCBI-ProteinID:
USF30579
UniProt:
N1ZE66
LinkDB
All DBs
Position
complement(1993755..1995731)
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AA seq
658 aa
AA seq
DB search
MNENQTNYNNESITSLKGADRVRLRPSVIFGSDGLEGCQHSIFEILSNSIDEAREGYGSF
IEVTRYKDHSVRVKDYGRGIPVDYNSKEQRYNWELVFCELYAGGKYQNNSGENYEFSLGL
NGLGTCATQYSSNYMNAIIHRDGYCYTLHFEKGENIGGLKKEQSIETTTGTEIKWLPDRD
VFTNIDIPLSFFQDILKKQAIVNAGLTFVLYDEETNNSFTYVYENGIKDYLKELNEQKAF
TEIQYYEQETRGRDREDKPEYKLKFQIAFCFNNDVNLLEYYHNSSFLEYGGSPDRAVKNA
FVFAIDKYLKANNLYKKEEKKITFNDIEDSLVLVINSFSTITSYENQTKKSITNKFIQDA
MTEYLRHQLEIYFIENKLEADKIATQVLANKRSRETAEKTRINIRKKLTGSIDMNNRVEK
FVNCRSKDITRREIYIVEGDSALGACKLGRDAEFQAIIPIRGKILNCLKADYNKIFNNDI
ITDLLKVLGCGVEIKSKHNSNINSFDLEQLRWNKIIICTDADVDGFQIRTLILTMLYRLV
PTLIKEKKVFIAESPLYEITCGKDTYFAYSDAEKNTIVSKIKNKKYKINRSKGLGENQPE
MMWQTTMNPETRRLILVSDDEVEKTQQKFELLLGENLKGRKKFIETEGYRYLDLSDLS
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaatcagacaaattataataatgaaagtattacatctttaaaaggagcagat
agagttcgtcttcgtcctagtgttatttttggttctgatggtttagaaggctgccaacat
tctatatttgaaatactttctaattctattgatgaagcaagagagggatatggttctttt
atagaagtaacgcgttataaagaccattctgttcgtgtaaaagactatggacgtggtatt
cctgttgattataattcaaaagaacaacgatacaactgggaacttgtattttgtgaatta
tatgctggtggaaaatatcaaaataattctggtgaaaattatgaatttagtttaggtttg
aatggtttaggtacttgtgcaacacagtattcgtctaattatatgaatgctattattcat
agagatggatattgttatacgcttcattttgaaaaaggagaaaacataggcggtttaaaa
aaagaacaaagtattgaaacaacaactggtactgaaatcaagtggttgccagacagagat
gtttttacaaatattgatattcccctttccttttttcaagatatattaaaaaaacaggct
attgttaatgcaggattaacatttgtgttatatgatgaagaaacaaataattctttcact
tatgtttatgaaaatggtattaaagactatttaaaagaattaaatgaacaaaaagcattt
acagaaatacaatattatgaacaagaaacaagaggtcgtgatagagaagataaaccagaa
tataaattaaaatttcaaattgctttttgttttaacaatgatgtaaatttattagaatat
tatcataattccagttttttagagtatggaggttcaccagatagagcagtaaaaaatgcc
tttgtttttgcgattgataaatatttaaaagcaaacaatttatataaaaaagaggaaaag
aaaattacatttaatgatatagaagacagtttagtattagtcattaattctttttctacc
attacaagttatgaaaatcaaaccaaaaaatcaattacaaataaatttatacaagatgct
atgacagaatatcttcgtcatcagcttgaaatatattttatagagaataaattagaagca
gataaaattgcaacacaggttttagcaaataaaagaagtcgtgaaacagcagaaaaaaca
cgtattaacataagaaaaaaattaactggtagtattgatatgaataatcgtgttgaaaaa
tttgtaaattgtcgttctaaagatattacaagacgagaaatctatattgtagaaggcgat
tctgctttaggggcttgtaaattaggcagagatgcagaattccaagcaatcatacctatt
cgtggtaaaatattaaattgtttaaaggcagattataacaaaatttttaacaacgatatt
attacagatttattaaaagtattgggttgtggtgttgaaattaaatcaaaacataattct
aatatcaactcatttgatttggagcagcttcgttggaataaaattattatttgtacagat
gctgatgtagatggctttcaaattagaacattgatattaacaatgctttatcgtcttgta
cctacattgattaaagagaaaaaagtgtttattgctgagtcccctctttatgaaattact
tgtggaaaagatacttattttgcttattcagatgctgaaaaaaatactattgtatcaaaa
ataaagaataaaaaatataaaataaatcgttctaagggcttaggagaaaatcaacctgaa
atgatgtggcaaactacaatgaaccctgaaacaagaagattaatattagtttctgacgat
gaggtggaaaaaacacaacaaaaatttgaattacttttaggtgaaaatttaaaaggaaga
aaaaaatttattgaaacagagggataccgctatttagatttaagtgatttaagttaa
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