Clostridium sp. MD294: C820_002103
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Entry
C820_002103 CDS
T10174
Symbol
radA_2
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
clod Clostridium sp. MD294
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clod03400
]
C820_002103 (radA_2)
DNA repair and recombination proteins [BR:
clod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C820_002103 (radA_2)
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Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_LapB
ATPase
AAA_25
DnaB_C
DUF7125
ChlI
AAA_22
AAA
AAA_19
RecA_N
nSTAND_NTPase5
ABC_tran
KdpD
NPHP3_N
nSTAND3
IstB_IS21
YqeC
AAA_30
CbiA
DUF7129
Motif
Other DBs
NCBI-ProteinID:
USF30660
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Position
2088219..2089610
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AA seq
463 aa
AA seq
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MRKKIIYKCMQCGYESLKWMGRCTECGTWNSLEEMNSFDNNENKKSMLNRTKNVSSKVLK
LTNVEVGKNQRILTGIHEFDRVMGGGIVKDSVTILTSPPGGGKSTLTLAISGEVAKQGKK
VLYATGEESDSQIKNRANRILEQIHENIWIIADTSLNSVLDAIIEIDADLIIVDSIQTFT
LDEFLPARAGNPTQTMECANALVQCAKNKERQRAIILIGQMNKNDEMAGLRSLEHLVDTV
LFMEGNHEEELRSIVATKNRFGSTGEMGFFTMTEKGLISIDNPSEYFITKREKGELVSGS
TITVIKEGSRPVISEIESLVSNSFTPYPSRICEAMKKDQMNTLISVLEQRGKISLYDKNV
VIKTTGGIKLKEQAVNLAVIMCIASSVYNKPIPWDYAFIADVGLTGELKKVPSIEHRVKE
LDRMGFVKVFVPQNCMRKIMFQNIEVIECKTLMQVITYCIGKK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaagaaaataatctataaatgtatgcagtgtggttatgagtcattaaaatggatg
ggacgttgtacagagtgtggtacttggaacagtttggaggagatgaatagttttgataat
aacgagaataaaaaaagtatgttgaatagaacaaaaaatgtttcctctaaagtattaaag
ctgacaaatgtggaagtaggaaaaaatcaaagaattttaacagggatacatgaatttgat
agagttatgggaggaggaattgtaaaagattctgtaacaatattaacttctcctcctggc
ggaggaaagtctacattaacattagctatttcaggtgaagttgcgaaacaaggaaaaaag
gtgctttatgctactggagaagaaagtgatagtcaaattaaaaatagagctaaccgtata
ttggaacaaattcatgaaaatatttggattattgcagataccagtttaaatagtgtatta
gatgctattatagaaatagatgctgacttaattattgtagatagtatacaaacatttacg
cttgacgaatttttaccagcaagagcaggtaatcctactcagacaatggaatgtgctaat
gcgttagtacaatgcgcaaaaaataaagaaagacaaagagcaattatattgataggtcaa
atgaataaaaatgatgaaatggcaggattacgttcattagaacatttagtagatacagtt
ttgtttatggaaggaaatcatgaggaagaattaaggagtattgttgctacaaaaaatagg
tttggaagcacaggggaaatgggtttttttactatgacagaaaaaggactgatttcaatt
gacaatccttcggaatattttattacaaaaagagaaaaaggggagttagtttctggaagt
acaattactgtaataaaagaaggttctcgtcctgtcatttcagaaatagaaagccttgtt
tcaaattcttttacaccatatccttcgcgtatttgtgaagcaatgaaaaaagatcaaatg
aatacattgatttctgtattagagcaaaggggaaaaatttcattgtatgataaaaatgtt
gttattaaaacgacaggaggcattaaattaaaagaacaagctgtaaatttagcagtaatt
atgtgtattgcttcttcggtgtataataagccaattccttgggactatgcttttattgct
gatgtaggattgacaggagagctaaaaaaagtaccttctatagagcatcgtgtaaaagaa
ttagatagaatggggtttgtaaaagtttttgttcctcaaaactgtatgagaaaaataatg
tttcaaaatattgaagtcatagaatgtaaaactttaatgcaagtaattacctattgtata
ggtaaaaaataa
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