Clostridium sp. MD294: C820_002184
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Entry
C820_002184 CDS
T10174
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
clod Clostridium sp. MD294
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clod03400
]
C820_002184 (addA)
Enzymes [BR:
clod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C820_002184 (addA)
DNA repair and recombination proteins [BR:
clod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C820_002184 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
USF30741
LinkDB
All DBs
Position
complement(2201796..2205497)
Genome browser
AA seq
1233 aa
AA seq
DB search
MWTKEQQKAIDTRNCNLLISAAAGSGKTAVLVQRIISMITDKNNPIDVDKLLVVTFTNAA
ASEMKQRIGDAIAKQLENNPLDEHLQNQLTNLNRADIKTIHSFCLQVIKENYYKLDIDPV
MRTADETEIKLLKQEVITDLFERLYSEENTEFYTLVEMFGNDTKDDKLKELILNIYDFLL
GCPEPLKWLEEAIEMFHLSEHNTLENTIWAEILHQKMTEEINMICYYLKCALELTQYESD
FETYAQYLQTELEMAENCKKQCSLPFRHAETAIRQVYFDKLPAYRGEHKDIKEKIIDFRN
KAKKTFENLQKSIFPYTIQTMEEHMKQLYPIMKYLGNVIKLFMEEYKNVKKEKRILDFGD
YEHFCLEILLEKGSTPENILPTEAAIELQKKYEEVFTDEYQDSNLIQEMILSSVSKKTIG
KYNRFMVGDVKQSIYGFRLAMPEIFMQKYNEYALEEGKEQKILLSQNFRSRENILHGINF
IFRQIMSEQVGGLTYDENAALYAGAKFPPFHGNCGGDNEIILLNLQNRTEEEECEDILEE
WSQAEKEAFIIAKRIKKMMTEENYHILDKKTGQYRTVAFRDIAILLRSSKRWNGIFDSIF
IKEDIPFYAETSLGYFETLEVMTILNLLQLLDNPIQDIPLLSVLHSPIYHFTAEELMQIR
MMSEEKEDSYYDCIKKCIQEYEQNTIQQDMKVIAERLKIVFDNISNWRKKARESSISQLL
WYLYGETGYFDYVGVTAGGKLRQANLRFLIKKAEEYEKTSLKGLFHFVRYIENIKKAEDT
SGSAKLLNEGENMVRIMTIHKSKGLEFPVVFVSDMGKNFNISDLKKDVLLDHKIGIGVDY
MDLEQRAKYTTWAKEAVKLKIKQNNISEEMRVLYVALTRAKEKLILTGSIKEKNIEKWCS
YESTQKGMLPYYKMAQASNYLDWIMPAILNHKAGKEFLKKYGFYCDNTVVLQDASQWNIT
LVNEQQENENEATQYEKQKKIMDYFEQWNNEKDYSNKRNQIFDALDWRYAQQLSTTLQTN
ITISEIKKKWQEQIGLLQQEQQWNITMKLPKFEKEAKKLTAAEVGTATHTFMEQCDIKKQ
YTKEEIIKQIASLVEQNILSEQEAKALNVNEITKFFQSELAQRIRNADVVEQEKRFSMLM
EASEIFPQKEYELIKDSVMINGIIDCFFEENGQIVLIDYKNNRLWGQKTADTLKKQYEIQ
MKLYKKALEKATGKNVKEVYLYSFALGEALLIQ
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atgtggacaaaggaacaacaaaaagccattgatacaagaaattgtaatcttttaatttcc
gcagcagcaggttcaggaaaaacagctgtacttgtacaacgtattatttctatgataaca
gataaaaataatcctattgatgtagataaacttcttgtagtaacatttacaaatgcagca
gcatcagagatgaaacaaagaattggagatgctatagcaaaacaattagaaaataatcct
cttgatgaacatttgcaaaatcagttaacaaatttgaatagagctgatattaaaacaata
cattctttttgtttacaagtaataaaagaaaactattataaactagacattgaccctgtt
atgagaacagcagatgaaacagaaataaaacttttaaaacaagaagttataacagatttg
tttgaaagattatatagtgaagaaaatacagaattttatacattagtagaaatgtttgga
aatgatacaaaagatgataaattaaaagaattgatattaaatatttacgattttttatta
ggttgtccagaaccgttaaagtggctggaagaagcaatagaaatgtttcatttgtcagaa
cataatacattagaaaatactatttgggcagaaatattacatcaaaaaatgacagaagaa
ataaatatgatatgttattatttaaaatgtgctttagaattaacacaatacgaaagtgac
tttgaaacatatgcacaatatttacaaacagaattagaaatggcggagaattgcaaaaaa
caatgttctctgccttttcgtcatgcagaaacagctattagacaagtatattttgataaa
ctgcctgcctacagaggagagcataaagatataaaagaaaaaatcattgattttagaaat
aaggcgaaaaaaacatttgaaaatttacagaaaagtatttttccttatactatacaaaca
atggaagaacatatgaaacagctatatcctataatgaaatatttaggaaatgtaataaaa
ttgtttatggaagaatataaaaatgtaaaaaaagaaaaaagaatattagattttggagat
tatgaacacttttgtttagagatacttttagaaaaaggaagtacaccagaaaatatatta
cctacagaagctgcaatagaattgcagaaaaaatatgaggaagtatttacagatgagtat
caagatagcaatttaatacaagaaatgatattatcttctgtttctaaaaaaactatagga
aaatataaccgttttatggtgggagatgtaaaacaaagtatttatggttttagattagct
atgcctgaaatttttatgcaaaaatacaatgaatatgcattagaagaaggaaaagaacaa
aaaatattactttctcaaaattttagaagccgtgaaaatatattacatggtattaacttt
atatttcgccaaataatgtctgagcaagtaggaggactaacatatgatgaaaatgctgca
ttatatgcaggagcgaaatttccaccatttcatggaaattgtggaggagataacgaaatt
atattattaaatttacaaaatagaacagaagaagaggaatgtgaggatattttagaagaa
tggagtcaagcagaaaaagaagcatttattattgcaaaacgtattaaaaaaatgatgaca
gaagaaaattatcatattttggataaaaaaactgggcaatatcgtactgtagcatttcgt
gatattgcgatattactgagaagtagtaaaagatggaatggaatttttgacagtattttt
ataaaagaagatattcctttttatgctgaaacttcgttagggtattttgaaacattggaa
gttatgacaatattaaatcttttgcaattattggataatcctatacaagatattcctttg
ctttctgtattacattctcctatataccattttacagcagaagaattaatgcaaattaga
atgatgagtgaagaaaaagaagatagctactatgattgtataaaaaaatgtatacaagaa
tatgagcaaaatacaatacaacaagatatgaaagtgattgcagaaagattgaaaatagta
tttgataatatttctaattggagaaaaaaagcaagagaaagttctattagtcaattgctt
tggtatctttatggagaaacaggatattttgactatgtaggtgttacagcgggaggaaaa
ttaagacaagcaaatttacgttttttaatcaaaaaagcagaagaatatgaaaaaacaagt
ttaaaaggattatttcattttgtaagatacattgaaaatattaaaaaagcagaagatact
tctggatcagccaaattactgaatgaaggagaaaatatggtacgcattatgacaatacat
aaaagtaaaggcttagaatttcctgttgtttttgtttctgatatgggaaaaaattttaat
ataagcgatttaaaaaaagatgtattgttagaccataaaataggtattggtgtagattat
atggatttggaacaaagagcaaaatatactacttgggcaaaagaagcagtaaaactaaaa
ataaaacaaaataatatttctgaagaaatgcgtgtgctttatgttgcacttactcgagca
aaagaaaagctaatattgacaggaagcataaaagaaaaaaatattgaaaaatggtgcagc
tatgaaagtacacaaaaaggaatgttaccgtattataaaatggcacaagcaagtaattat
ttggattggataatgccagcaatattaaatcataaagcaggaaaagaatttttaaaaaaa
tatggtttttactgtgacaatactgtagtgttgcaagatgcttctcagtggaacattaca
ttagtaaatgagcaacaggaaaatgaaaatgaagcaacacaatatgaaaaacaaaagaaa
ataatggactattttgaacagtggaataatgaaaaagattatagtaataaaagaaatcaa
atttttgatgctttagattggagatatgcacaacagctttctactacactacagacaaat
attacaatttctgaaattaaaaaaaagtggcaagaacaaatcggcttattacagcaagaa
cagcaatggaatattactatgaaactgcctaaatttgaaaaagaagcaaaaaaattaact
gcagcagaagttggtacagcaacacatacttttatggaacaatgtgatattaaaaagcaa
tatacaaaagaagaaattataaaacaaattgcttctttagtagagcaaaatatactatct
gaacaagaagcaaaagcattaaatgtaaatgaaataacaaaattttttcaatctgaatta
gctcaaagaatacgaaatgcagatgttgttgagcaagaaaaaagattttctatgcttatg
gaagcaagtgaaatttttcctcaaaaagaatatgaattaataaaagatagtgttatgata
aatggtattatagattgtttttttgaagaaaatggacaaattgtattaatagactataaa
aataatagactgtggggacaaaaaactgctgatacattaaaaaaacaatatgagatacaa
atgaaattatataaaaaagcattagaaaaagccactggaaaaaatgtaaaagaagtttat
ttatattcttttgcattaggagaagcacttttgatacaataa
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