Clostridium sp. MD294: C820_002238
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Entry
C820_002238 CDS
T10174
Symbol
lptB
Name
(GenBank) Lipopolysaccharide export system ATP-binding protein LptB
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
clod Clostridium sp. MD294
Pathway
clod02010
ABC transporters
clod02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C820_002238 (lptB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C820_002238 (lptB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clod02000
]
C820_002238 (lptB)
Transporters [BR:
clod02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C820_002238 (lptB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
BCA_ABC_TP_C
AAA_15
AAA_22
AAA_23
AAA_30
AAA_28
AAA_13
AAA_29
nSTAND3
AAA_19
SRPRB
AAA
MMR_HSR1
FeoB_N
RsgA_GTPase
AAA_14
SMC_N
Motif
Other DBs
NCBI-ProteinID:
USF30795
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All DBs
Position
complement(2263358..2264116)
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AA seq
252 aa
AA seq
DB search
MALLEVKNLSISFGGLRAVDDFNISIEKNQLYGLIGPNGAGKTTIFNLLTGVYRPTEGSI
ELDGVSLVGKTASEICREGFARTFQNIRLFNRLTVLDNIKTALHNQVKYSLLDSMLHTSK
YKKLEKEMNKRAINILKEFDLDKEADVVSENLPYGKQRKLEIARALATNPKVLLLDEPAA
GMNPTETLELMDTIRNIRDKFHIAILLIEHDMNLVLGICEELVVLDYGRVIAKGLPLDVV
NDPTVITAYIGD
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcttgaggtaaaaaatttaagtatatcatttggaggattaagagctgttgat
gattttaatattagtatagaaaaaaatcagctttatggtttaattggcccaaatggtgca
ggaaaaacaacaatatttaatcttttgacaggagtatatcgccctacagagggaagtata
gaattagatggtgtaagtttggtaggaaaaacagcttcagaaatttgtagagaaggtttt
gctcgtacatttcagaatatacgtctttttaatagattaacagtgttggataatatcaag
acagcattgcataatcaagtaaaatattctttattggatagtatgctacatacttcaaaa
tataaaaaactagaaaaagaaatgaataaaagagccataaatatattaaaagaatttgat
ttagataaagaagcagatgtagtttctgaaaatttgccttatggtaaacaaagaaaatta
gaaattgcgagagcattagcaacaaatccaaaagtacttttgttagacgaaccagcagca
ggcatgaacccaacagaaacattagaattgatggataccattagaaatatacgtgataaa
tttcatattgcgatacttttgattgaacacgatatgaatttagtgttaggtatttgtgag
gaattagttgttttggactacggcagagtaattgcaaaaggattgcctttagatgtagta
aatgaccctactgttattacagcatatataggagattaa
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