Clostridium sp. MD294: C820_002282
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Entry
C820_002282 CDS
T10174
Symbol
cycB
Name
(GenBank) Cyclodextrin-binding protein
KO
K15770
arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
Organism
clod Clostridium sp. MD294
Pathway
clod02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C820_002282 (cycB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clod02000
]
C820_002282 (cycB)
Transporters [BR:
clod02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Arabinogalactan oligomer/maltooligosaccharide transport system
C820_002282 (cycB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
DUF4969
Motif
Other DBs
NCBI-ProteinID:
USF30838
UniProt:
N1ZI30
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All DBs
Position
complement(2315532..2316773)
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AA seq
413 aa
AA seq
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MKKRIVIVMFLLVILCITAASGCDKKENEQSISSNDIETVELLLWGAKEDEVLLNKIIQT
FQQEYQGQANFQITFQEQGETECKDTILGGLEESADVFTFADDQLSALAAAGALNPIENA
DSIKQMNLSTAVEAATVRDTLYAYPLTADNGYFLYYNKRYFSDEDIQALDTILDIAANNG
NFFCMDWSSAWYIYSFFGNTNMKIGLNEDGITNYCTWNDKEGDICGVDVAKAMLNIAMKP
AFLNRTDEEFLEGVRNGTVIAGVSGVWNAVAIKEVWGEDMGAAKLPTYTCNDRQIQMASF
SGCKLIGVNAYSKHYDWACKLAEWITNEQNQKLRFELREQGPSNIQAASSMEVQQSPAIA
ALLEQSEFSQLQRVGGKFWDPVAAFGENIASGNATGEDLQEQLDKMVKNITER
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaatagtaatagtgatgtttttgctggtaattttatgtataacagcagca
tcaggctgtgataaaaaggagaatgaacaaagtatttcttcaaatgatattgaaacagtc
gagctattgctttggggagcaaaagaagatgaggttcttttgaataaaatcatacaaaca
ttccaacaagaatatcaaggacaggcaaattttcaaattacatttcaagaacaaggagaa
acagaatgtaaagatacaattttaggcggtttagaagaaagtgcggatgtatttacattt
gcagatgaccagctgagtgcattagcagcagcaggtgcattaaatcctatagaaaatgct
gatagtataaaacaaatgaatttatcaacagcagtagaagcagctactgtaagagataca
ttatatgcttatcctttgacagcagataatggatattttttatattacaataagcgatat
ttcagcgatgaagatattcaagcattagatactattttagatattgcagcaaataatggc
aatttcttttgtatggattggtcttctgcatggtatatttattctttttttggcaataca
aatatgaaaattggactaaatgaagatggtattacaaattattgtacatggaatgataaa
gagggcgatatttgtggtgtagatgtggctaaagctatgttaaatattgcaatgaaacca
gcttttttaaatagaacagatgaagaatttttagaaggagtaagaaatggaacagtgatt
gctggcgttagtggtgtatggaatgctgtagcaataaaagaagtatggggagaggatatg
ggtgcagcgaaattaccaacatatacttgtaatgaccgtcaaatacaaatggcgtcgttt
tcaggttgtaagctaataggtgtaaatgcttattctaagcattatgattgggcttgtaaa
ttagcagaatggattacaaatgaacaaaatcaaaaacttcgttttgaattacgtgagcaa
ggaccatctaatatacaggcagcttcttctatggaagtacaacaatctccagctattgca
gcgttattagaacagtcggaattttctcaactacaaagagtaggaggaaaattttgggac
cctgtagcagcttttggtgaaaatatagcttctggaaatgccacaggagaagacttacaa
gagcaattagataaaatggtaaaaaatattactgaaagataa
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