Clostridium sp. MD294: C820_002369
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Entry
C820_002369 CDS
T10174
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
clod Clostridium sp. MD294
Pathway
clod03030
DNA replication
clod03430
Mismatch repair
clod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C820_002369 (polC)
03430 Mismatch repair
C820_002369 (polC)
03440 Homologous recombination
C820_002369 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clod03032
]
C820_002369 (polC)
03400 DNA repair and recombination proteins [BR:
clod03400
]
C820_002369 (polC)
Enzymes [BR:
clod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C820_002369 (polC)
DNA replication proteins [BR:
clod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C820_002369 (polC)
DNA repair and recombination proteins [BR:
clod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C820_002369 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NI
DNA_pol3_a_NII
RNase_H_2
HHH_3
tRNA_anti-codon
DEDDh_C
GMT-wHTH
T2SSK
SSB
tRNA_anti_2
Rubredoxin
Motif
Other DBs
NCBI-ProteinID:
USF30925
UniProt:
N1ZSV2
LinkDB
All DBs
Position
complement(2385442..2389785)
Genome browser
AA seq
1447 aa
AA seq
DB search
MTTKTFPAVFERISLSEAVQKAFCNSVVENIIVHKRQKNLEVHLISDEILQYTALQQLQN
ELLNQLPGIKEVSISPFFNVKEKFSENEIIEKCWENVVCEISSESPICKGIMKEAYWQLQ
QKKLLIYVKNNTAYYMCKKGIEEKIQQYLQQQTGLQFRVMFKDVHISEQEKEELSQKQIS
KQNEMIAQISAKQAEAEKMRNAQQTEAVSEGIIKGVLFGKEFNGAVSKIYDSKIEGEKVI
IEGNLFHVETREIKGEKYIVSFDITDLSDSTTVKFFVKKNIFEKELKTYIKSGNYVRVQG
EVQFDKYAKEINIMAKNIMLAEAPPKRKDNAEQKRVELHLHTQMSSMDGVTNVKTYIKRA
IEWGHKAIAITDHGVVQAFPDAMNAANGTDLKVIYGVEAYLIDDLGNVVMCPKGQSLQDT
FIVFDIETTGLSKENDKITEIGAVKVENGKITDRFSTFVNPKRRLSEEIVKLTNITDDML
KDAPTIDTVLPEFLKFCGNNVLVAHNAGFDVGFIRNNAEALHMPSVDNTVLDTVELSRTL
LPELKKHKLDIVAEHLGVSLEGHHRAVNDAEATAEIFIKLIAMLEQKGITNIDEINVLAS
RTVNYNKLKSHHAIILVKNNTGLRNLYELVSKAHINYYFRRPRIPKSEYLKLKEGLMIGS
ACEAGELYRALLDNKPKEYIEEIVNFYDYLEIQPLGNNHFMIASQKIDAVRSVEDIKDFN
RKIVHLGEQYNKLVVATCDAHFIDPEDAVYRKVIMTAEGFSDAENQPPLYYRTTEEMLSE
FQYLGEQKAKEIVITNTNKIADSIEKIKPIPDETFPPKIDGAEEQLKQITMQKAISIYGD
PLPKIVQQRLDKELNSIIKNGFSVLYIIAQKLVWKSVADGYLVGSRGSVGSSFVANMAGI
TEVNSLPPHYVCPKCKYSDFESDVVKAAAMEEGSGCDMPDKNCPVCGTLLNKEGHDIPFE
TFLGFDGDKEPDIDLNFSGEYQQTAHAYTEELFGTGHVFKAGTIGTLAEKTAYGFVKKYF
DGKEITAHNAEINRLVQGCTGIKRTTGQHPGGLMVVPSDHDIYEFCPIQRPANDMNSTIT
TTHFDYHSISGRLLKLDLLGHDDPTVIRMLYDLTGVNPQSVSLGDKGTMSLFESPKVLGV
TSEQIGCETGTLGIPEFGTKFVRQMLLDTKPKTFADLLRISGLSHGTDVWIGNAQTLIEN
KVITLKETISTRDSIMIYLINKGVEKKKSFKIMEKVRKGKGLDENDIADMKANNVPDWYI
DSCQKIKYMFPKAHAAAYVMMAFRIAYFKVNYPLAYYASYFTVRACDDFDYTSMCLGEEI
AKQAIHDINAKGIEATTKEKNKLTVLEIVVEFYARGFHFLPIDLYESDAKKFIIKGNGLI
PPFHSLQGLGDTAAQSIVEGRQKGGEFKTIEEFKERTSVGKTLVELLKENGVLKGIPDTN
QLSLFMD
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacaaaaacatttcctgctgtttttgaaagaatatctctttctgaagcagtacaa
aaagcattttgtaatagtgttgtagaaaatattattgtacacaaaaggcaaaaaaattta
gaagtacatttaatttctgatgagatactgcaatatactgcattgcagcagcttcaaaat
gagttgttaaatcagcttcctggtataaaagaagtgagtatcagcccattttttaatgta
aaagaaaaattttcagaaaatgaaattattgaaaaatgttgggaaaatgtagtgtgtgaa
atttcatcagaaagtcccatttgtaagggtattatgaaagaagcatattggcaactacaa
caaaaaaaattattaatttatgtaaaaaataatactgcatattatatgtgtaaaaaaggc
atagaagaaaaaattcagcaatatttacaacaacaaacagggttacaattccgtgtaatg
tttaaagatgtacacatttctgagcaagaaaaagaagaattgtctcaaaaacaaatttct
aagcaaaatgaaatgatagcacaaataagtgcaaaacaggcagaagcagaaaaaatgcgt
aatgcacaacaaacagaagctgtttctgaaggcattataaaaggagttcttttcggtaaa
gaatttaatggtgctgtttcaaaaatatatgacagtaaaatagaaggtgaaaaagtaatt
attgaaggcaatttgttccatgtagaaacgagagaaataaaaggagaaaaatatattgtt
tcatttgatattacagatttatcagactctactactgtaaagttttttgtcaaaaaaaat
atttttgaaaaagaattaaaaacatatataaaaagtggcaattatgtgcgtgtacaagga
gaggtacagtttgataaatatgctaaagaaattaacattatggcaaaaaatattatgcta
gcagaagcacctcctaaaagaaaagataatgcagaacaaaaaagagtagaactgcatttg
cacacacaaatgagtagtatggacggtgtaacaaatgtaaaaacatatattaaaagagca
atagaatggggacacaaagccattgctattacagaccatggtgtagtacaagcatttccg
gatgctatgaatgcagctaatggtacagatttaaaagtaatttatggtgtagaagcgtat
ttgatagatgatttaggtaatgttgtgatgtgtccaaaaggacaaagcttacaggataca
tttatagtatttgatattgaaacaacaggactttctaaagagaatgataaaattactgaa
attggtgctgtcaaagtagaaaatggtaaaataacagatagatttagtacatttgtaaat
cctaaaagacgtttaagtgaagaaatcgtaaaactaacaaatattactgatgatatgtta
aaagatgcccctacgattgatacagtattgcctgaatttttgaaattttgtggaaataac
gtacttgtggcacacaatgcaggttttgatgtaggttttattcgaaacaatgcagaagca
ttacatatgccttctgtagataacactgttttagatactgtagaattatccagaacactt
ttaccagagttaaaaaagcataaattagatattgttgcagagcatttaggggtttcatta
gagggacatcatagagctgtaaatgatgcagaagctacagcagaaatttttataaaatta
attgctatgttggaacaaaaaggtattacaaatatagatgaaattaatgttttggcaagt
agaacagtgaattataataaattaaaatcgcatcatgctattatattggtaaaaaataat
acaggattaagaaatttatatgaattggtatcaaaagcacatatcaattattattttaga
cgaccacgtattcctaaaagtgaatatttgaaattaaaagaagggcttatgataggaagt
gcttgtgaagcaggtgaattatatagagcattgcttgacaataaaccgaaagaatatatt
gaagaaattgtaaatttctatgattatttagaaatacagcctttaggaaataaccatttt
atgattgcttcacaaaaaatagatgcagttcgttctgtagaagatattaaagattttaat
agaaaaattgtgcacttgggagaacagtataataaattggtagtagcgacttgtgatgca
cattttatagacccagaagatgcagtgtatagaaaagtaattatgacagcagagggattt
tctgatgcagaaaatcaaccaccattatattatagaacaacagaagaaatgctttcagaa
tttcagtatttaggagaacaaaaagcaaaagaaattgttataacaaatacaaataaaatt
gcagatagtattgaaaaaataaaaccaatacctgatgaaacatttccacctaaaattgat
ggtgcagaagaacagctcaaacaaattacaatgcaaaaagcaatatcaatatatggtgac
cctttgccaaaaattgtacaacaaagattagataaagaattaaattctattattaaaaat
ggattttctgtgttgtatattattgcacaaaagctagtttggaaatctgttgcagatggc
tatttagtaggttctcgtggttctgttggttcttcttttgtggcaaatatggcaggtatt
acagaagtaaattcattacctccacattatgtttgtccaaagtgtaaatattctgatttt
gagtctgatgttgtaaaagcagcagctatggaagaaggcagtggttgtgatatgccagat
aaaaattgtccagtttgtggcacattactcaataaagaaggacatgatattccttttgaa
acatttttaggatttgatggagataaagagcctgatattgacttaaatttttcgggagag
tatcagcaaacagcacatgcttatacagaagaattgtttggtacaggtcacgtttttaaa
gctggtacaataggcacattggcagaaaaaacagcatatggttttgtaaaaaaatatttt
gatggaaaagaaataacagctcataatgcagaaattaaccgtttggtacaaggttgcaca
ggtattaaaagaacaacaggacaacaccctggtggtcttatggttgtaccaagtgaccat
gatatttatgagttttgtcctatacaaagaccagcaaatgatatgaattctaccattact
acaacacattttgattatcattctattagtggacgtcttttaaaattggatttgctagga
catgacgaccctactgtaattagaatgttgtatgatttaacaggagtaaatcctcaaagc
gtttcattgggagataaaggtactatgtcattgtttgagtcgcctaaagtattaggagta
acatcagagcaaataggctgcgaaacaggtacattaggcataccagaatttggaacaaaa
tttgtaagacaaatgcttcttgatacaaaacctaaaacatttgcagatttattaagaata
tcaggactttctcatggtactgatgtttggataggtaatgctcaaacattaatagaaaat
aaagttattacattaaaagaaacaatttctacacgtgatagtattatgatttatttaatc
aataaaggagtagaaaaaaagaaatcatttaaaattatggaaaaagtaagaaaaggaaaa
ggattagacgaaaatgacattgcagatatgaaagcaaataatgtgccagattggtatata
gactcctgccaaaaaataaaatatatgtttccaaaggcacacgctgctgcatatgttatg
atggcatttcgtattgcttattttaaagtaaattatcctttggcttattacgcatcgtat
tttacagtaagggcgtgtgatgattttgactatacttctatgtgcttgggagaagaaata
gcaaaacaagcaatacatgacattaatgcaaaaggtatagaagcaactacaaaagaaaaa
aataaattgacagtattagaaattgttgtagaattttatgcaagaggatttcatttttta
cctattgatttatatgagtctgatgcaaaaaaatttattataaaaggaaatggattaatt
cctccttttcattctttgcagggactgggagatacagcagcacaaagtattgtagagggc
agacaaaagggaggagaatttaaaacaatagaagaatttaaagaaagaacttctgtaggc
aaaacacttgttgaattgttaaaagaaaatggtgtattaaagggaataccagatacaaat
cagttgtcattatttatggattaa
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