KEGG   Clostridium sp. MD294: C820_002493
Entry
C820_002493       CDS       T10174                                 
Name
(GenBank) CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A)
  KO
K07016  CRISPR-associated protein Csm1
Organism
clod  Clostridium sp. MD294
Brite
KEGG Orthology (KO) [BR:clod00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:clod02048]
    C820_002493
Prokaryotic defense system [BR:clod02048]
 CRISPR-Cas system
  Type III CRISPR-Cas system
   Type III signiture cas proteins
    C820_002493
SSDB
Motif
Pfam: Cas10-Cmr2_palm2 Csm1_B Cmr2_hel_dom2 HD mCpol C1_2
Other DBs
NCBI-ProteinID: USF31047
UniProt: N1ZNV3
LinkDB
Position
2537490..2539814
AA seq 774 aa
MNDTEYLITIGGLLHDVGKLLYRYNDKRNHSISGFEFIQKEADINDVNILEQIHYHHAAL
LKNAKLADNSLAYITCIADNISAAADRRKSNEEGWGFVREIPLESIFNRLNGNDENKKYP
PAMLDKGINYPIDEKNKTIKYNQEFYGKCVNNIKNCIKAIEYDENYINSLLEVLEANISF
IPSSTSINEVADISLFDHSKTTAAIACCIYQYLKQNNIINYKSELFLKSNDFYHKKVFLL
YSMDISGIQDFIYTISTDKALKNLRARSFYIELIMEHIIDELLCTLSLSRANLLYCGGGH
AYMILSNTEKTIKVISDYEKEINDWFLKNFGTALYIAGGFASCSANDLKNEPQGSYGDIF
KNVSNNISQKKSSRYTASDIIKLNDNTTDGERECSVCRKTEKLNDNQRCSICEVLENFSN
DIINKQFFSVVKKSQGLPMPRNMYILADDKRSLIQKMTKENYVRAYCKNKMHTGFNIVCK
LWVGDYKNGDTFEDLAKAANGIARLGVLRADIDNLGQAFVCGFESNKNKDTYVTISRTAT
FSRKLSMFFKLHINEILANGQYCTISDKEGERNIAIVYSGGDDVFVVGAWDDVIEFAIDL
NDALSDYAQGTLTISAGIGIYPQKYPISTMAIQTGELEELSKQYPDKNAITLFGEGNTYH
WDTFVNDVLEDKYLTIKDFFESIENKNSSTARGKAFLYRLLELMKNREEKINLARFAYVL
SRLQPNEEEDKQASENYNQFAKKMYHWIRDEEQCRQVITAIYIYIYSIREREEE
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgaatgatacagagtatctaattacaattggtggactactacatgatgttggaaaactt
ctttatagatataatgataaaagaaatcatagtattagtggctttgaatttattcaaaaa
gaagctgatattaatgatgtcaatatattagaacaaatacattatcatcatgcagcactt
ttaaaaaatgcaaagttagcagataattctttagcatacattacttgtattgcagataac
atttcagcagcagcagacagaagaaaaagcaatgaagaaggttggggatttgttagagaa
attcctttagaaagcatatttaataggttaaatggaaacgatgaaaataaaaaatatcct
ccagctatgcttgataagggtattaactatcctatagacgaaaaaaataaaactataaaa
tataatcaggaattttatggaaaatgtgttaacaatataaagaattgcatcaaagcaata
gaatatgacgaaaattatatcaattctttattagaagtgttggaagcaaatatttctttt
attccttcttctacttctattaatgaagttgcagatatttctctttttgatcattctaaa
acaacagcagcaatcgcttgctgtatttatcaatatttaaaacaaaacaatattataaat
tataaatcagaactttttttaaaatcaaatgatttttatcataaaaaagtttttttatta
tatagcatggatatatctggtatacaggatttcatttataccatcagtacagataaagca
cttaaaaatctgagagcacgttccttttatattgaacttattatggaacacattatagat
gaactattatgtacattatcactttctagggcaaaccttttgtattgtggtggtggtcat
gcttatatgatactttctaatacagaaaaaacaataaaagtaatttctgattatgaaaaa
gaaatcaatgattggttcttaaaaaattttggtacagcactttatattgctggaggattt
gcttcatgtagtgcgaatgatttaaaaaatgaacctcaaggaagttatggtgatattttt
aaaaatgtatcaaataatatttcgcaaaaaaaatcttctagatatactgcttctgatatt
ataaaattaaatgataatacaacagatggagaaagagaatgttctgtgtgtagaaaaacg
gaaaaattaaatgacaatcaaagatgttctatttgtgaagtgttagaaaatttttcaaat
gatattattaataaacagttttttagtgttgtaaaaaaatcacaggggcttcctatgcct
agaaatatgtatattttagctgatgataaacgaagcctaattcaaaaaatgacaaaagaa
aattatgttagggcatattgtaaaaataaaatgcacacaggatttaatattgtttgtaaa
ttatgggttggagattataaaaatggtgatacttttgaagatttggcaaaagcagcaaat
ggtatcgcaaggttaggtgttttacgtgctgatattgataatttagggcaggcatttgta
tgtggctttgaaagtaataaaaataaagatacttatgttacaatttcaagaacggcaaca
ttttcaagaaaattatctatgttttttaaattacatattaatgaaattcttgcaaatgga
caatattgtactatttctgataaagaaggcgaaagaaatattgctattgtatattcaggt
ggagatgatgtttttgttgttggtgcatgggacgatgttatagagtttgcaatagatttg
aatgatgcattaagcgattatgctcaaggaacacttacaatatcagcaggaataggaata
tatcctcaaaaatatccgatttctacaatggcaatacagacaggagaattagaagaactt
tcgaaacaatatcctgataaaaatgctattacattatttggagaaggaaatacttatcac
tgggatacatttgtaaatgatgtgttagaagataagtatttaacaataaaagactttttt
gaaagcattgaaaataaaaatagtagtactgcaagaggaaaagcatttttatatcgttta
cttgaattaatgaaaaatagggaagaaaaaataaaccttgcacgttttgcttatgtactt
tccagattgcagccaaatgaagaagaagacaaacaagcaagtgaaaattataatcaattt
gctaaaaaaatgtatcattggataagagatgaagaacaatgcagacaagtcattacagca
atttatatttatatttatagcattagagaaagggaggaagaatga

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