Clostridium sp. MD294: C820_002834
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Entry
C820_002834 CDS
T10174
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
clod Clostridium sp. MD294
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clod03019
]
C820_002834 (yhaM)
Messenger RNA biogenesis [BR:
clod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C820_002834 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
TraI_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
USF31388
UniProt:
N1Z786
LinkDB
All DBs
Position
complement(2873337..2874278)
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AA seq
313 aa
AA seq
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MRYINELKEGESVIGHYLCKSRQSLKSRAGKTYLSLKLQDKTGMVDAKVWDMTNDIKTFE
ENEYIKIDATVVTYQNDIQLNVKRIRRSMEGEYDPADYIPCTEKNIEEMYQKLMSYIKTI
ENPYIKKLLEAIFYKHPIVSKQFKTHSAAKSVHHSYMGGLLEHTLSVTEICDFAAPRYKY
VNRDILIASAMLHDVGKLIELSEFPENDYTDDGQLLGHLMIGSELIKDTASDIEGFPKTL
ESLLKHCMISHHGEYEYGSPKLPKTIEAFILHCADNLDAKTKVFEEMIDNNSNQGNWAGY
HKMLQRNIRKSEY
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgagatatataaatgaattaaaagaaggagagtctgttatagggcattacctttgcaaa
agtagacaatctttaaaatccagagcaggaaaaacctatttatctttaaaattgcaagat
aaaacaggaatggtagatgcaaaagtttgggatatgacaaatgacattaaaacatttgaa
gaaaatgaatatattaaaatagatgcaacagtagtgacttatcaaaatgatattcaatta
aatgtaaaaagaatacgacgtagtatggagggggaatatgacccagcagattatattcct
tgtacagaaaaaaatattgaagaaatgtatcaaaaattgatgtcttatattaaaacgata
gaaaatccttatattaaaaaattgttagaagctattttttataaacaccctattgtgagc
aaacagtttaaaacacattctgctgccaaaagcgtacatcatagctatatgggcggtttg
ttagagcatacactttctgtaacagaaatatgtgactttgcagcaccacgttataaatat
gtgaatagagatattttaattgcttcggctatgctacatgatgtaggaaaactgatagaa
ctttcagaatttccagaaaatgactatacagatgatggacaactattaggacatttgatg
ataggttctgaactaataaaagatactgcttctgatatagaaggttttcctaaaacatta
gaaagtttgttaaaacattgtatgatttctcatcatggagaatatgaatatggttctcct
aaattgcctaaaacaatagaggcttttatactgcattgtgcagataatttagatgctaaa
acgaaagtatttgaggaaatgatagacaataacagtaatcaaggaaattgggcaggttat
cacaaaatgcttcaaagaaatatcagaaaatccgaatattaa
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