Clostridium sp. LQ25: ONV75_00115
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Entry
ONV75_00115 CDS
T10526
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
clol Clostridium sp. LQ25
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clol03400
]
ONV75_00115 (addA)
Enzymes [BR:
clol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ONV75_00115 (addA)
DNA repair and recombination proteins [BR:
clol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ONV75_00115 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
DEAD
AAA_30
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UZT06340
LinkDB
All DBs
Position
1:23850..27608
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AA seq
1252 aa
AA seq
DB search
MGETKWTDEQLSAIKTRNCNLLVAAAAGSGKTAVLVERIIRIITNKDNPVDIDKLLVVTF
TNAAAAEMRERIAAAISKALDKEPTSKNLQKQLTLLNRANITTMHSFCLDVIKNNFHKID
LDPSFRIGDQTEGILIKDEVIETLFEEKYDQEDTEFTSLVEAFSTYKNDDNLKELIINMY
NFIMSGPWPENWLKENAEAFNIETMEKLNNSKWVLVLKNSIKVEIEGYIKMLEKAIEIIN
LTDGLEPYLETFSNELYSIKNAYNSIDCGLDDIYSSLCSISFGRLKSIKKDKVSDENAQN
TVKSIRDDIKKKISELINNTFSVTPEEMLINIKGAYPTIKKLTELVLEFGEKFSQKKKEK
NILDFNDLEHLCLKILSDKDENGNIIPSKTAIEFKNLFDEVLVDEYQDSNNVQETIIELV
SRRKDEFPNVFMVGDVKQSIYRFRQAKPELFMEKYINYTLEESNNRKIQLYKNFRSRKEV
IDGVNYIFKEIMSETVGELEYTDEEALNLGASYENSEDENVILGGPIEVNIIEKSIEESD
LNKEKLDEEDFENEEIEGVNLEGKIVAKRIKELMTTTGNNVFKVLDKETGEYRPIKYKDI
VILLRATKNWSESLLDELGQEGIPAYADTGSGYFESIEIRTIMSLLRVIDNPMQDVPVIA
VLKSPIMGFSAEDLSIIRLKNKEKYFYENIADIAEGNICDISEELITRCRGFLEKLEIWR
NKAIYMPIDEFIWYLYMDTAYYGYVGAMPNGVLRQANLKILFQRAKQFEQTSFKGLFNFI
NFINKLTKSSGDMGSAKILGENEDVVRIMSIHKSKGLEFPVVFLCGTGKQFNLMDLNKNI
LYHDELGFGPDFVDLEKRVSIGTIAKEAIKKKMKLETLSEEVRILYVACTRAKEKLIITG
TVNNIQKSIEKWVSSASLDYNLILPSEILKGKSYLDWIGMSLCQHNDGKVLREKIAVSNE
ISKDDNSKWDIKLWKRSDIVVNNEDGKLEEEKEVKLSILEEEYDKDVYGEVDKRLSYKYP
LKESTKLKSNISVSDLKKRNAEFIDQNVESINIEEVESKNKRTIITPKFLQEEKGLTAAE
KGTAVHFVMKKIDLDKVSSIHEIKDQIQYLYENDFILEEEMKAVNPSKILNFFKSDLGKM
MTELHKEGKKIYRELPFYTEISSVNIDNTLSEEYENEKVRLQGIIDCFFEYNGESILLDY
KTDYVSKDNEAELQKKYIKQLDYYSDAVFKITGKKVSKRYLYSFYLEKVIEI
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaacaaagtggactgatgagcagctaagtgcaattaaaacgcgaaattgtaac
ctacttgttgcagctgcagcaggatcaggtaaaacagctgttttggtagaaaggattata
agaataataactaataaagataatccagttgatattgataagttattagtagttacattt
acaaatgcagcagctgctgagatgcgtgaaagaatagcagctgcaatatcaaaggctctt
gataaggaaccaacatcaaaaaacctacaaaagcagcttacattattaaatagagctaat
ataacaacaatgcattcattttgtcttgatgtaataaaaaataattttcataaaatagat
ttagatccttcatttagaattggtgatcaaacagaaggaattttaattaaagatgaggtt
atagagacactttttgaagaaaaatatgatcaagaagatactgagtttacatcattagtt
gaagcttttagtacctataaaaatgacgataatttaaaagaattaataataaatatgtat
aattttataatgtcaggaccatggcctgaaaattggcttaaagagaatgcagaagcattt
aatatagagacaatggaaaaattaaataatagcaagtgggttttagttttaaagaacagt
ataaaagttgaaattgaaggatatattaaaatgcttgaaaaggcaatagaaataattaat
ttaactgatggcttggagccttatttagaaacattttcaaatgaactatattctataaaa
aatgcttataattctattgattgtggtttagatgatatttatagttcattatgttcaata
tcttttggaagattaaaatctattaaaaaggataaagtttcagatgaaaatgctcaaaat
acagtaaagagtataagagatgatataaaaaagaaaatatcagagttaataaacaatact
ttttcagtaactccagaagaaatgcttataaatattaaaggtgcatatcctactattaaa
aagttaacagagcttgttttagaatttggtgaaaagtttagccaaaagaaaaaagagaaa
aatattctcgattttaatgatctggaacacttgtgtttaaaaatactaagtgataaagat
gaaaatggaaatataattccatctaagactgcaattgaatttaaaaatttatttgatgaa
gttcttgtagatgaatatcaggattcaaataatgttcaagaaactataatagaacttgtc
tcaagaagaaaagatgaatttcctaatgtatttatggttggagatgtaaagcagagcata
tatagatttagacaggcaaaacctgaacttttcatggagaaatatattaattatacatta
gaagaaagcaataatagaaagattcagctatataagaacttcagaagtcgtaaagaagtt
atagatggagttaactatatatttaaggaaataatgtctgagacggttggagaacttgaa
tataccgatgaggaagctttaaatttaggtgcttcatatgaaaattcagaagatgaaaat
gtaattttgggaggaccaatagaggttaacataatagaaaaaagcattgaagaatccgat
ttaaataaagagaaattagatgaagaagattttgaaaatgaagaaattgaaggagttaat
cttgaaggaaaaattgttgccaaaagaattaaagaattaatgaccactacaggaaataat
gtattcaaggttttagacaaagaaacaggtgaatataggcctattaagtataaagacata
gtaattcttttgagagctacaaagaactggtctgagagccttttagatgaacttggtcaa
gaaggaattccagcatatgcagacactggctcaggatattttgaatcaattgaaataagg
actataatgtctttgttaagagttatcgataatccaatgcaggatgttcctgttattgca
gtattgaaatctccaataatgggattttcggcagaggatttaagtattataagactcaaa
aataaggaaaaatatttttatgaaaatatagcagatattgccgaggggaatatttgtgac
atatctgaagaactcattacaagatgtaggggctttcttgaaaagcttgaaatatggaga
aataaagccatatatatgcctatagatgagtttatatggtatctatatatggatacagct
tattatggttatgttggagctatgccaaacggtgtgttaagacaggcaaacttaaaaata
ttgttccaaagagcaaagcaatttgaacaaactagttttaaaggactattcaattttatt
aattttatcaataagcttacaaagtcatccggggatatgggaagtgctaagatacttggt
gagaatgaagatgtagtaagaataatgagtatacataagagtaaggggttagaatttcca
gtagtatttttatgtggaacaggaaaacagtttaatttaatggatcttaataaaaatata
ctatatcatgatgaacttggatttggacctgattttgttgatcttgaaaaaagagtaagt
ataggaacaatagcgaaagaagctattaagaaaaaaatgaagctggaaactttatcagaa
gaagtacgaattctatatgttgcatgtacaagagcaaaagaaaaacttattataactgga
actgtaaataatattcagaagagtatagaaaagtgggtatcttcagcttcgttagattat
aatttaatactgccttcagagatattaaaaggaaaatcatatttggattggattggtatg
tctttgtgtcagcataatgatggaaaagtattaagggaaaaaatagctgtatcaaatgaa
atatctaaagatgataactctaaatgggatattaaattatggaagagaagcgatattgta
gttaataatgaagacggcaaattagaagaagaaaaagaagtaaaattatcaatattagaa
gaagagtatgataaagatgtttatggtgaagtagataagagattatcatataaatatcca
ttaaaagaatcaactaaattaaaaagtaatatttcagtttctgacttaaagaaaagaaat
gctgaatttattgatcagaatgttgagagcattaatattgaagaagttgaatcaaaaaat
aagagaacaataattacacctaaatttcttcaagaggaaaagggcttaactgcagcggag
aaaggtactgctgtacattttgttatgaaaaaaatagatttagataaagtatcttcaata
catgaaattaaggatcagatacagtacctatatgaaaatgactttattttagaagaggaa
atgaaagctgttaatccatctaaaattttgaatttctttaaaagtgatttgggtaaaatg
atgactgaacttcataaagaaggaaaaaaaatatatcgtgaacttcctttttatactgaa
ataagtagtgtaaatatagataatacccttagtgaagaatatgaaaatgaaaaagtaaga
ttacaaggaattatagattgcttttttgaatataatggagaaagtatactgttagattat
aaaactgactatgtatctaaggataatgaagcagaactacagaaaaaatatataaagcaa
cttgattactatagtgatgcggtatttaaaataacaggaaaaaaagtatcaaagagatac
ttatattcattttatttagaaaaagtaattgaaatataa
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