Clostridium sp. LQ25: ONV75_00980
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Entry
ONV75_00980 CDS
T10526
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
clol Clostridium sp. LQ25
Pathway
clol03020
RNA polymerase
Brite
Enzymes [BR:
clol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ONV75_00980 (rpoC)
Transcription machinery [BR:
clol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ONV75_00980 (rpoC)
DNA repair and recombination proteins [BR:
clol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ONV75_00980 (rpoC)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UZT06490
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Position
1:203418..206954
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AA seq
1178 aa
AA seq
DB search
MFELNNFDAIQIGLASPDQIRAWSRGEVKKPETINYRTLKPERDGLFCERIFGPMKDWEC
HCGKYKRVRYKGIVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDM
SPRALEKVLYFASYIVTDPKETPLLKKQLLNEKEYREACDKYGEDSFVASMGAEAIQELL
AEIDLEAGSKELKEELKQSTGQKKVRIIRRLEVVESFRKSGNNPEWMVINVIPVIPPDLR
PMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNG
RRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPK
EMAIELFKPFVMKKLVQDGIAHNIKSAKRMVERVQPQVWDVLEEVIADHPVLLNRAPTLH
RLGIQAFQPILVEGRAIKLHPLACTAYNADFDGDQMAVHLPLSVEAQAEARFLMLAATNI
LKPSDGKPVCVPTQDMVLGSYYLTMDKDGAKGEGMTFSSKDEAIMAYESKAIAVHAKINV
RMFREIDGVVRHKVIKTTVGKLIFNESVPQNLGFVDRKNEDEMFNLEIDFLVTKKSLGKI
IDNCYLEHGPVKTSIMLDNIKALGYHYSSIGAVTVATSDIKVPPEKFELLKEADETIEKI
EKMYKRGFISDDERYERVIEKWTKTTEEVADALMDSMDKFNPIFMMADSGARGSKSQIKQ
LAGMRGLMASPSGKIIELPIRASFKEGLDVLEYFSSTHGARKGNADTALKTADSGYLTRR
LVDVSQDVIVREEDCGTDDGLYVSEIKEGNEVVEELKERLIGRYTAEDIINPENGEIIVA
NNQYMDPYIAERVVAAGIKKVKIKSVFTCNCKVGVCSHCYGMNMATAKKIDIGEAVGIIA
AQSIGEPGTQLTMRTFHTGGVATGADITQGLPRVEELFEARKPKGLAIVSEVTGTVKMEE
TKKKRTVVVMTADGEERSYDIPFGSRLKVTDGDNIEAGDEITEGSVNPHDIMSIKGIDGA
RRYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKIKVTDSGDTDLLPGTMIDMFDFREEN
ARVREFGGEEAKGEETLLGITKAALATDSFLSAASFQETTRVLTEAAIKGKVDPLVGLKE
NVIIGKLIPAGTGMMRYRDLKVDNVEEVVEEAITETVE
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgaattaaataattttgatgcaatacaaatcggtttagcatctccagatcaaata
agagcttggtcaagaggagaagttaagaaaccagaaacaattaactacagaacattaaag
ccagaaagagatggtttattctgtgaaagaatttttggacctatgaaggactgggaatgt
cactgtggaaaatataagagagtaagatacaaaggtatagtttgtgacagatgtggtgtt
gaagttacaaaagctaaagtaagaagagaaagaatggggcacattgaactggctgcccca
gtatctcacatttggtacttcaaggggattccatcaagaatgggattaattcttgatatg
tcaccaagagctttagaaaaagttttatattttgcatcttatatagtgacagatcctaag
gaaacacctttattaaagaaacaacttcttaacgaaaaagaatatagagaagcttgtgat
aaatatggtgaagatagctttgttgctagtatgggtgctgaagcaattcaagaactttta
gcagaaatagatttagaagcaggttcaaaggaacttaaagaagaattaaaacaaagtaca
ggtcaaaagaaagttagaattataagaagactggaagttgttgaatcatttagaaaatca
ggaaataatcctgaatggatggtaattaacgtaattccagttattccaccagatttaaga
ccaatggttcaattagatggtggtagatttgctacatctgacttgaatgatttatataga
agagttattaatagaaataacagattaaaaaaattattagatttaggtgctccagatatc
attgtaagaaatgaaaagagaatgcttcaagaagcagttgatgcacttattgataatggt
agaagaggtagaccggtaactggaccaggaaatagacctttaaaatctctttcggatatg
ttaaaaggtaagcaaggtagatttagacaaaacttacttggtaagagagttgactactct
ggtagatcagttatagttgttggtccagaattaaaaatgtatcaatgtggtcttccaaaa
gaaatggcgattgagttatttaaaccatttgttatgaagaagcttgtacaagatggaatt
gcacacaatattaagagtgcaaagagaatggtagaaagagttcaaccacaagtttgggat
gtgttagaagaagttattgctgatcatccagttttacttaaccgtgctccgactctacat
agacttggaattcaagcattccaaccaatacttgttgaaggtagagcaattaagttacat
ccattagcatgtacagcgtacaacgctgacttcgatggagaccaaatggctgtccatctt
ccactttcagtagaagcacaagcagaagcaagatttttaatgcttgcagctacaaatata
ttaaaaccttcagatggtaaaccagtttgtgtacctacacaggatatggttcttggttct
tattacttaactatggataaggatggagctaagggtgaaggaatgacattctcaagtaaa
gatgaagctataatggcatacgaaagtaaagctattgcagttcatgctaaaattaatgtt
agaatgtttagagaaattgatggagttgttagacataaagttattaagactactgttggt
aagcttatatttaatgaatcagttcctcaaaacttaggatttgtagatagaaaaaatgaa
gatgaaatgtttaacttagaaatagatttcttagttactaaaaaatctttaggaaaaatt
atagataactgttacttagaacatggtcctgtaaagacttctataatgcttgataatata
aaagcattaggatatcattattcatctataggagctgtaacagtagcaacatctgatatc
aaagtaccacctgaaaaatttgagttacttaaagaagcagatgaaactattgaaaagatc
gaaaagatgtataagagaggtttcatatcagatgatgaaagatatgagagagttatagaa
aaatggactaagacaacagaagaagttgccgatgcattaatggatagtatggataagttt
aatccaatattcatgatggctgactctggagccagaggttctaagtcacagatcaagcag
cttgctggtatgagaggacttatggcaagtccatctggtaagattatcgaattaccaatc
agagcatcgttcaaagaaggtctagatgtactagaatatttctcatctacacatggtgct
agaaaaggtaatgccgatacagccttaaagactgccgattcaggatacctaacaagaaga
cttgttgacgtttcacaagatgttatcgtaagagaagaagattgtggaactgatgatgga
ttatatgtaagtgaaattaaagaaggcaacgaagttgttgaagaattaaaagaaagatta
attggtagatatactgctgaagatataattaatcctgaaaatggtgagattattgttgca
aacaatcaatatatggatccatatattgcagaaagagttgtagcagcaggtatcaaaaaa
gttaagattaaatcagtatttacatgtaactgtaaagtaggtgtatgttcacactgttat
ggtatgaatatggctactgctaagaaaatcgatattggtgaagctgttggtatcatagca
gcgcaatcaatcggtgaaccaggaacacagcttacaatgagaacattccatacaggtggt
gttgccactggtgcagatatcactcaaggtttacctagagttgaagaattattcgaagct
agaaaaccaaagggtcttgcaatagtaagtgaagtgactggtacagttaaaatggaagaa
actaagaaaaagagaacagttgttgtaatgactgctgacggtgaagaacgtagctacgat
attccattcggttcaagattaaaagtaactgatggagataatatagaagctggagatgaa
atcacagaaggttctgttaatccacatgatatcatgagtattaagggaattgatggagca
agaagatacttactttcagaagttcaaaaagtttacagacttcaaggggttgatatcaac
gataagcatctagaagttgttgttagacaaatgactagaaagattaaggtaactgattct
ggagatactgatttattaccaggtacaatgatagatatgtttgactttagagaagaaaat
gctagagttagagaatttggaggagaagaagctaagggtgaagaaacattattaggtatt
actaaggcagccttagcaactgatagtttcttatcagcagcatctttccaagaaactact
agagtattaactgaagcagcaattaaaggaaaagttgatccattagttgggttaaaagaa
aatgtaattattggtaagcttattccagcaggtactggtatgatgagatatagagatctt
aaagtagataatgttgaagaagtagtagaagaagctataactgaaactgtagaataa
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