Clostridium sp. LQ25: ONV75_01930
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Entry
ONV75_01930 CDS
T10526
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clol Clostridium sp. LQ25
Pathway
clol03420
Nucleotide excision repair
clol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ONV75_01930
03430 Mismatch repair
ONV75_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clol03400
]
ONV75_01930
Enzymes [BR:
clol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ONV75_01930
DNA repair and recombination proteins [BR:
clol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ONV75_01930
MMR (mismatch excision repair)
Other MMR factors
ONV75_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
Intein_splicing
UvrD_C_2
Viral_helicase1
AAA_30
AAA_14
ResIII
DUF3553
Hint_2
Motif
Other DBs
NCBI-ProteinID:
UZT06674
LinkDB
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Position
1:408158..411511
Genome browser
AA seq
1117 aa
AA seq
DB search
MLDLKNLLNKEQYEGATTIEGQVLILAGAGSGKTRVLTHRIAHMVEDLNIAPYNILAITF
TNKAAKEMKDRVRALIGECAENMWISTFHSTCVKILRREIDKIGYKSSFTIYDSSDQKTL
VKECMKTVNINDKDISEQEIISKIGKAKDRMQTARSFKLENESNFRENKIADVYEMYQKR
LKENNALDFDDLIFKTVELFKSNPETLEFYQRKFKYIMVDEYQDTNGAQYELVKLLASKY
KNICVVGDDDQCLVEGTMVSTENKDVEIEKLMKEDLVRVASGNGETSLLKISDINKKKYC
GKIVKITTKNNRVIKATPNHISFGKISLEEDKYYVYLMYKSGFGYRIGQTSSVRSRDDRD
ASGLAIRLNGEQADKMWIIKVCDTKGDATYYEQYYSVKYGIPTIVFNSRGRNITISQEQI
EKMFKEIDTINAAEKLMEDEFLYNEYPHHLSNAVIRGDSIRKRVNLSFFGGKKSVQRGIY
SHRIGLNSSADDSKNKFIEAGFNVRDGQRNTYRVETERALYDEAEEFARKLSMVEESFEI
LKKAKLSNDKSFMFMPIGSFKPGMSIAIQNSEKIEEDIVISVELEDYDGYVYDLNIDNAR
NYIANGIVVHNCIYQWRGADIKNILDFEKDYPDAKVIKLEQNYRSKGNILNAANVVIVNN
SNRKSKALRTEQELGSKIKVYRAYSDSDEGDFVGKQILDIRKNEDKKYNDFAILYRTNAQ
SRIFEESFRRKGIPYKIVGGTRFYDRKEIKDILAYLKVLINPQDDISIRRIINVPKRSIG
DATVNKIQDFADSFELNMWDALSEVRSIPTLTPRNVSCIDPFVQLMENLMILSETTPVSM
LIETILEDTGYMDQLKKSNEIEDKSRIENLKELVSDAVDFEKNSEDKSLSAYLEKVSLVQ
DTDKIEDEDDSVVLMTVHSAKGLEFPVVFMVGMENGIFPGSASFEKESEMEESRRLCYVG
ITRAKEILFMTSAEVRRVFGKTVAYSQSDFINEIKPDLKEYVSVEKTGIKSRESFINKSS
YNNPHSLRNNMTRTVSGSGLNASRPNSIGSSSIGNVSSGDYISVAEATMGRKVMHEKFGV
GTIVSVQNSGDDKKLTIAFDKQGVKVLLLSFAKLKMI
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaaaacttacttaataaagaacaatatgaaggggcaactacaattgaa
ggtcaagtattgattttagcaggagcagggtcaggaaaaactagagttttaactcataga
attgctcatatggtagaggacttaaatattgcaccttataatattttagcaattacattt
acaaataaggctgctaaggaaatgaaagacagagttagggcacttattggtgaatgtgct
gaaaatatgtggatatctactttccattcaacatgtgtaaaaattttaagaagagaaata
gataaaataggatataaatcaagttttactatatatgacagttctgatcagaagacatta
gtaaaagagtgtatgaaaactgttaatataaatgataaagatatatcagaacaagaaata
attagtaaaatagggaaagctaaagatagaatgcaaactgcacgaagttttaagctagaa
aatgaatcaaattttagagaaaacaaaatagctgatgtatatgaaatgtatcagaagaga
cttaaagaaaataatgctttagattttgatgatttaatatttaaaacagtagagttattt
aagagtaatcctgaaacactggaattttatcaaagaaagtttaagtatattatggttgat
gagtatcaggataccaatggtgctcaatatgaactagttaagcttcttgcatctaaatac
aaaaatatttgtgttgtaggggatgatgatcagtgcttagttgaaggaactatggtttct
acagaaaataaagatgttgaaatagaaaagcttatgaaagaagatttagttagagttgca
tcaggtaatggtgaaacttcattacttaaaataagtgatataaataagaaaaaatattgt
ggaaagatagtaaaaataactacaaaaaacaatagagttataaaagctacacctaatcat
atttcatttgggaaaatatcattagaagaagataagtactatgtttacttaatgtacaaa
agtgggtttgggtatagaataggtcaaacttcatcagtaagatctagagacgatagagat
gctagtggattagctataagattaaatggagaacaggctgataaaatgtggataatcaaa
gtttgtgacacaaaaggtgatgcaacttattatgaacagtattattcagtgaaatatgga
ataccgacaatagtatttaattcaagaggtagaaatataacaatctcacaagaacagata
gaaaaaatgtttaaagaaattgatactataaatgcagctgagaagcttatggaagacgaa
ttcttatataatgaatatccacatcatttgagtaatgcagtgataagaggagactctatt
agaaagagagttaatttaagcttttttggaggaaagaagtctgttcaaagagggatatat
tcacatagaataggacttaattcatcggcagatgactcaaaaaataaatttatagaagca
ggatttaatgttagagatggtcaaagaaatacatatagagtagaaacggaaagagcttta
tatgatgaagctgaggaatttgcaagaaagcttagtatggtggaagagagttttgagatt
ctaaaaaaggcaaagctttctaatgataagagttttatgtttatgcctataggaagtttt
aaaccaggaatgtctattgctatacaaaatagtgagaaaatagaagaggatattgtaata
tctgttgaattagaagattatgatggatatgtatatgacttaaatattgataatgcacga
aactatattgcaaatggtattgtagttcataattgtatttatcaatggagaggggcagat
ataaaaaatatcttagattttgaaaaagattatcctgatgcaaaggtaataaaattagag
cagaattatagatcgaaaggtaatatattaaatgctgccaatgtagttatagtcaataac
tcaaatagaaagagtaaggctcttagaactgaacaggaattaggtagtaagataaaggtt
tatagagcttattcggatagcgatgaaggagactttgttggaaaacaaattttagatata
agaaaaaatgaagataaaaagtataatgattttgcaatattatatagaactaatgctcag
tcaagaatttttgaggaaagtttcagaagaaagggaattccttataaaattgtaggagga
actagattctacgatagaaaagaaattaaagatattcttgcttacttaaaggttcttata
aatcctcaagatgatataagtataagaagaattattaatgttccaaagagaagtataggt
gatgcaactgtaaataagattcaagattttgctgatagtttcgagttaaatatgtgggat
gcattaagtgaagtaagaagtattccaacattaacacctagaaatgtatcatgtattgat
ccattcgttcaattgatggaaaacttaatgattttaagtgaaactactccagtttcaatg
cttattgaaacaatattagaagatacaggatatatggatcagttaaaaaagtctaatgaa
atagaagataagagtagaattgaaaacttaaaggaattagtatctgatgcagttgatttt
gaaaaaaatagtgaagataagtcattatcagcatatttagaaaaggtttctttggttcaa
gatacagataaaattgaagatgaagatgatagtgttgtacttatgacagtacatagtgct
aaagggcttgaattcccagtagtatttatggttggtatggaaaatggtatatttccaggt
agtgcttcatttgaaaaagaatcagaaatggaagaatcaagaagattatgttatgttggt
ataacaagagctaaagaaatactatttatgacttcagcagaggtaagaagagtatttggt
aagacagtagcatattctcaatcagattttataaatgagataaaaccagacttaaaagaa
tatgtttcggtggaaaaaacaggaattaaaagtcgagagtcatttataaataaaagttca
tataataatccacatagtttgagaaataatatgactagaacagtttctggaagtgggctt
aatgcaagtagacctaattctattggatcttcttcaataggtaatgtatcttcaggtgat
tatatttcagttgcagaagctacaatgggaagaaaagtaatgcatgaaaaattcggagtt
ggaactatagtatcagtccaaaattcaggagatgataaaaaacttactattgcctttgat
aaacaaggggtaaaagtcttgctattatcatttgcaaagcttaaaatgatataa
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