Clostridium sp. LQ25: ONV75_06350
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Entry
ONV75_06350 CDS
T10526
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
clol Clostridium sp. LQ25
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clol03032
]
ONV75_06350 (topA)
03400 DNA repair and recombination proteins [BR:
clol03400
]
ONV75_06350 (topA)
Enzymes [BR:
clol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ONV75_06350 (topA)
DNA replication proteins [BR:
clol03032
]
Prokaryotic type
DNA Topoisomerases
ONV75_06350 (topA)
DNA repair and recombination proteins [BR:
clol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ONV75_06350 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_RPB9
Mre11_C
Toprim_4
Toprim_2
GST_C_7
HypA
Motif
Other DBs
NCBI-ProteinID:
UZT07475
LinkDB
All DBs
Position
1:1367402..1369495
Genome browser
AA seq
697 aa
AA seq
DB search
MGQKLVIVESPAKAKTIGKYLGKNYIVEASMGHVRDLPKSKLGVDIENNYEPKYITIRGK
GELIDKLRKAAKKSDKVYLATDPDREGEAISWHLANILKISEDETCRIVFNEVTKSAVKA
SIKEARKINLDLVDAQQARRVLDRLVGYEISPILWKNVKWGLSAGRVQSAALKLICDREK
EIKEFIPKEYWSVDCVLKKERKKFPIRLSTYKNKKVELTNEEDCNKVIEDLNNGTFVVKS
IKKGKKTRNPLPPFTTSTLQQDANKKLNFNTKRTMSVAQVLYEGVEVKGHGTVGLITYMR
TDSVRISEEAQGKAKEFIEESFGKEYLPETTRIYKGKKNIQDAHEAIRPTYIEITPEIAK
ENLTPEQHKLYSLIWKRFVASQMASCTLNTNSIDILNGDYKFKASGSVIDFDGFMKIYEY
TNEDDENSVTLPSLEENEELKTASLEGSQHFTQPAPRYTEASFVKLLEEKGIGRPSTYVP
TIATILGRNYVVREKKTLIPTELGEIVNNILSEYFRQIVDADFTADMERKLDDVEVGNEN
WREIVSEFFSPLQEAIDKAEKEISKVVIEDKVSDVKCEKCGRMMVIKRGRYGEFLACPGY
PECKNAKPIVEELDVPCPECGKPIVAKKSKKGKKFFGCSGYPECTFVSWNEPVKEKCPKC
NSYMVLKYSKTKGNYIQCSNSECDYKEPVKEEKKEEE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaaacttgtaattgtagaatcgccagcaaaagcaaagactattggcaaatat
cttggtaaaaattatattgtagaagcatcgatgggacacgttagagatttgccaaagagt
aaattaggcgtagatatagaaaataattatgagcctaaatacattacaataagagggaaa
ggcgaattaatcgataaattaagaaaagctgctaaaaagtcagataaagtttatcttgca
accgaccccgatagagaaggggaagcgatttcgtggcatcttgcaaatattttaaagata
tcagaagatgaaacatgtagaatagtttttaatgaggtaacaaaaagtgctgttaaggca
tctataaaggaagcaagaaaaataaatcttgatcttgttgatgctcagcaggcgagaaga
gttttagatagacttgttggttatgaaataagtcctatattatggaagaatgttaagtgg
ggactaagtgctggaagagttcagtctgctgcgttgaaattaatatgtgatagagaaaag
gaaataaaagaatttatacctaaagaatactggtcggttgactgtgtattaaaaaaagag
agaaaaaaatttcctataagactttcaacttacaaaaataaaaaggttgagcttacgaat
gaagaggattgcaataaagtaatagaagatctcaataatggaacttttgtagtcaagagt
ataaagaagggaaaaaagacaagaaatccccttccaccatttacaacaagtacacttcag
caggatgccaataaaaaattgaattttaatacaaaaagaacaatgtctgtagcgcaagtt
ctttatgaaggtgttgaagttaaagggcatggtactgtaggattaataacatatatgaga
actgattctgtaagaatatcagaagaagctcaaggtaaagcaaaggaatttatagaagaa
agttttggaaaagaatatcttccagaaactacaaggatatataaaggaaagaaaaatatc
caagatgctcatgaagcaataagaccaacatatatagaaataacaccggaaatagctaaa
gaaaatttaactcctgaacagcataaattatattcactaatatggaagagatttgtagca
agtcagatggcttcatgtactttaaatacaaattcaattgatatattgaatggtgattat
aaatttaaagcatccgggtctgtgattgattttgatggttttatgaaaatttatgaatac
actaatgaagatgatgaaaattctgtaactctaccaagtttagaagaaaatgaagaactt
aaaacagcaagtcttgaaggaagtcagcattttactcagccagcaccaagatatacagaa
gcatcatttgttaaacttcttgaagaaaagggaataggaagacctagtacttatgttcca
acaatagcaactatattaggaaggaactatgttgtacgtgaaaagaagacattaattcct
actgagctgggagaaatagtaaataatattttaagtgagtattttagacaaatagtagat
gcggattttacggcagatatggaaagaaagcttgatgatgttgaagtaggaaatgaaaat
tggagagaaattgtatcggaattctttagtccgcttcaagaagctattgataaagcagaa
aaagaaatatcaaaagtagtaattgaagataaggttagtgatgttaaatgtgaaaaatgt
ggccgtatgatggttattaaaaggggacgttatggagaattcttagcatgtccgggatat
ccagaatgtaaaaatgctaaaccgattgtagaagaattggatgttccgtgtcctgagtgt
ggaaaacctattgtggctaaaaaaagtaaaaagggtaaaaagttttttgggtgctctggt
tatccagaatgtacttttgtaagctggaatgaacctgttaaagaaaagtgtccaaaatgt
aattcatatatggttttaaaatattcaaaaacaaaaggaaattatatacaatgctctaat
agtgaatgtgattataaagaaccagtgaaggaagaaaagaaagaagaagaatag
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