Clostridium sp. LQ25: ONV75_06410
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Entry
ONV75_06410 CDS
T10526
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
clol Clostridium sp. LQ25
Pathway
clol03030
DNA replication
clol03430
Mismatch repair
clol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ONV75_06410
03430 Mismatch repair
ONV75_06410
03440 Homologous recombination
ONV75_06410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clol03032
]
ONV75_06410
03400 DNA repair and recombination proteins [BR:
clol03400
]
ONV75_06410
Enzymes [BR:
clol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ONV75_06410
DNA replication proteins [BR:
clol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ONV75_06410
DNA repair and recombination proteins [BR:
clol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ONV75_06410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
HHH_6
DNA_pol3_a_NII
Rv2179c-like
RNase_H_2
HHH_3
tRNA_anti-codon
DEDDh_C
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
UZT07487
LinkDB
All DBs
Position
1:1380691..1385043
Genome browser
AA seq
1450 aa
AA seq
DB search
MSQEFMKMLKKDILNNEMLGEKDIVILRFQFFKKSQTLKIIVKCCDILNNVEEEEFRKLV
LKNLGFHVEVEIICYRDVTNCTIENIAGEHWSSAVEETARKFPLIKALLYSENREVKDKT
IFIYSGTPALVNHANNKKAGVLIEGAIKDIFGVGARVEFKFDEKLASIHNYEVAKLEENK
KIINDVMSGRLVTPGSLSSSSGKSESKKDISESKQPEKKREFQTYKRAPKDENTIMGGAI
KMETTNISDIDERSGYVAIIGDVFKTEIIETKTGKIIFTFCITDYTSSISVKCFLRPQDT
EAVLDEVKKGFYCKVRGEAVYDTYSREVVIMGRDINRMKKIEKMDGAPKKRVELHLHTTM
SSMDGMTAPGKLIGRAASWGHPAIAITDHGGVQAYPEAQSAAKKHGIKVLYGVEAYLVDD
GVPIVLNEKGDSLDDTYVVFDIETTGFSPVNDKIIEIGAVKIKNGEVIDNFSHFVNPERS
IPYIITELTSINNDMVRDAETIETLLPKFMEFCADSVLVAHNAAFDTGFIKKNCRDLGID
FNYSIMDTVPLARFLCPDLKKVKLNLVAKHLGISLDNHHRAVDDAKCTAEILLKFFTMLK
EDYSINTLKQLNDLFVSNFDIKKQPTYHAIILAKTQAGLKNLYKMISTAHIDNFQRRPRT
PKSLIAEMREGLIIGSACEAGEVYKAVLDGKSDEELKAIIEFYDYLEIQPIANNLFLIEK
GMVKDENELKAINKKIYDIGKECGKMTVATCDVHFMDPKDETFRRILMAGQGFKDADKQP
PLYFRTTEEMLKEFAYLGSEIANEVVIENTNKIADSIDIIKPIPDETFPPKIEGAEDDIR
NMTMNKVHSIYGENLPEVVQKRLDKELNSIINNGYAVLYLIAQKLVAKSNDDGYLVGSRG
SVGSSFVATMSDITEVNGLPPHYVCPNCKKSEFFMDGSVSSGADLDDKDCPECGTPYKKD
GHDIPFETFLGFEGDKEPDIDLNFSGEYQGVVHRYCEVLFGKGHTFKAGTIGTVAEKTAY
GYVKKYLDERGIVVPQAEVDRLTIGCTGIKRTTGQHPGGIMVVPADNEIYNFCPIQHPAD
DNDTDVITTHFDYHSISGRLLKLDILGHDDPTVLRMLQDITGLDPKTIPLNDKKVLSLFT
SPEALGVTKEELECEVGSYGLPEFGTKFVRQMLVDTQPKTFSDLVRISGLSHGTDVWLNN
AQYYIKEGFTTLRECIATRDDIMVYLMYKNIPPKTAFTIMEKVRKGKGLSEDDETLMKKH
NVPEWYIGSCKKIKYMFPKGHAVAYVMMAVRIAYFKVYYPQAYYATYFTVRADDFDANLI
CLGEGAVHAKLQELYALGNNASVKDKGMITVLELCFEAYKRGVNFLRVDLYKSDAVKFII
EDGNLRPPLNAIPGIADNAAKGIVEARKNGEFISKEDLRIRAGVSKTAIEGLTSHGCLEG
MSETNQLSLF
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcaggaatttatgaaaatgcttaagaaagacattcttaataatgaaatgttaggc
gaaaaggatattgtaatattaagatttcaattcttcaaaaaaagtcagactctaaaaata
atagttaagtgctgtgacatattgaataatgtagaagaagaagaatttagaaaattagta
ttaaaaaatttgggttttcatgttgaagttgaaattatatgttatagagatgttacaaac
tgtacaattgaaaatattgcaggagaacattggtcaagtgcggttgaagaaacagcaaga
aaatttccattaataaaggcacttttatattctgaaaatagagaagtgaaagataaaaca
atatttatatattctggaacacctgcacttgtaaatcatgcaaataataaaaaggcagga
gtattgattgaaggtgctataaaagatatttttggtgtaggtgcacgagttgaatttaaa
tttgatgaaaaactggcgagtatacataattatgaagtagcaaaacttgaggaaaacaaa
aagattataaatgatgttatgagtgggaggcttgttacaccaggatcacttagttcatct
tcaggtaaaagtgaaagtaaaaaagatatttcggaatcaaaacaaccagaaaagaaaaga
gagtttcagacatataagagagctccaaaggatgaaaatacaattatgggtggagctatt
aaaatggaaactactaacatttcggatattgatgaaagaagtggttatgtagctataatt
ggagatgtatttaaaactgaaatcattgaaacaaaaactgggaagattatatttactttt
tgtattacggattatacaagttccatatctgttaaatgcttcttacgtcctcaggatacg
gaagcagttcttgatgaagtgaaaaaaggtttctactgcaaggtgagaggtgaggctgta
tatgatacttattcaagagaagtagtaattatgggaagagatattaatagaatgaaaaag
atagagaagatggatggagctcctaaaaagagagttgaacttcatcttcacacaactatg
agcagtatggatgggatgacagcgccaggaaagcttattggaagagctgcatcttgggga
catcctgctatagctataacagatcatggtggggttcaggcttatccggaagctcagagt
gctgcaaagaaacatggaataaaggtattatatggagttgaagcgtaccttgttgatgat
ggcgtacctattgtattaaatgaaaagggtgattcattagatgatacttatgttgtattc
gatattgaaacaacaggattttcgccagttaatgataagataatagaaataggtgcagta
aagattaagaatggtgaagttatagataattttagtcattttgttaatccagaaaggagt
attccgtatataattactgaacttacaagtataaataatgatatggtaagagatgctgaa
actatagaaacacttcttcctaagttcatggaattctgcgctgattctgttcttgtagca
cataatgctgcatttgatactggttttataaagaaaaactgcagagatttagggattgac
tttaattattcaataatggatactgtacctcttgcgagatttttatgtcctgatcttaag
aaagttaaacttaaccttgtagcaaaacatcttgggatttcgctagataatcatcacagg
gccgtagatgatgctaaatgtacggcagagattttattaaagttctttacaatgcttaaa
gaggattatagcataaatactttgaagcaattaaatgatttatttgtttctaattttgat
ataaaaaaacaacctacatatcatgctataattcttgcaaagactcaggctggtcttaaa
aacctgtataagatgatttcaactgctcatattgataatttccagaggagacctagaact
cctaaaagtcttattgcagaaatgagagaaggacttattatagggtcagcatgtgaagct
ggtgaagtatataaggcagttcttgatggtaaaagtgatgaagaattaaaagccataata
gaattttatgattatcttgaaattcagcctatagcaaataatttattcctaattgaaaaa
ggaatggtaaaagatgaaaatgaacttaaggcaataaataagaaaatttatgatattggc
aaggaatgtggcaaaatgaccgtagctacatgtgatgttcattttatggaccctaaggat
gagacttttagaagaatacttatggcaggtcaggggtttaaggatgcagataaacagcca
ccattatattttaggacaacagaggaaatgcttaaggaatttgcatatttgggttctgag
atagcaaatgaagttgtaatagaaaatactaataaaatagcagattcaatagatattata
aaaccaatacctgatgagacttttcctcctaaaattgaaggagcagaagatgatataaga
aatatgactatgaacaaagtccatagcatatatggggaaaatcttcctgaggttgttcaa
aagagacttgataaggagcttaattctataataaataatggttatgcagttctttatctt
attgcacaaaaacttgttgcaaagtcaaatgatgatgggtaccttgttggttctagagga
tctgtaggttcatcttttgttgctaccatgtcagatattacagaagttaatggacttcca
ccacattatgtatgtccaaattgtaaaaaatctgaattttttatggatggatcagtaagt
tctggtgctgaccttgatgataaagattgtcctgaatgtggaacgccgtataaaaaggac
ggtcatgatataccttttgaaacattcttaggctttgaaggagataaggaaccagatata
gatcttaacttctcaggtgaatatcaaggagttgttcatagatattgtgaagtgttattt
ggaaaaggacacacatttaaggctggaacaataggtactgttgcagaaaagactgcttat
ggatatgtaaaaaaatatttggatgaaagaggtattgtagttccacaggcagaagtagat
agactgacaattggatgtactggaattaaaagaacaacaggacagcatcccggtggaata
atggttgtaccggcagataatgaaatatataatttttgtccaatacaacatccagcagat
gacaatgatacagatgtaataacaacacattttgattatcattcaatatcaggaagatta
cttaagttagatatacttggacatgacgatcctactgttcttagaatgcttcaagacatt
acaggccttgatcctaagacaatacctttaaatgataaaaaggttttaagtctttttact
tccccggaagctcttggagttacaaaagaagaacttgaatgtgaagttggaagttatggt
cttcctgaattcgggactaaatttgttagacagatgcttgtggatacacagccaaaaaca
ttttcagaccttgttagaatatcaggcctttctcatggtacagatgtttggcttaataat
gctcagtactatataaaagaaggttttactacacttagagaatgtatagcaacaagagat
gatataatggtttatcttatgtataagaatattcctcctaaaacagcctttacaataatg
gaaaaggtaagaaaaggaaaaggattatcggaagatgatgaaactttaatgaaaaaacat
aatgttccagagtggtatattggatcttgtaaaaaaattaaatatatgttccctaaaggt
catgccgttgcttatgttatgatggcagtgagaatagcatattttaaagtgtattatcca
caagcttattatgcaacgtacttcactgtaagagcggatgattttgatgcaaacttaata
tgtcttggtgagggagcggttcatgcaaaattacaggaattatatgctcttggaaataat
gcttcagtaaaagataaaggaatgattacagttcttgaattatgttttgaagcttataag
agaggagtaaattttcttagggtagatttatataaatcagatgcagttaaatttataatt
gaagatggaaatctaagaccaccattaaatgcaataccaggaatagctgataatgcagca
aaaggaattgttgaagcgagaaagaatggagagtttatttcaaaagaggacttaagaata
cgagcaggagtttctaagacagcaattgaaggacttacaagtcatggatgtcttgaagga
atgtctgaaacaaatcaactgtcacttttttag
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