Clostridium sp. LQ25: ONV75_06520
Help
Entry
ONV75_06520 CDS
T10526
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clol Clostridium sp. LQ25
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clol03009
]
ONV75_06520 (rimO)
Enzymes [BR:
clol01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ONV75_06520 (rimO)
Ribosome biogenesis [BR:
clol03009
]
Prokaryotic type
ribosomal protein modification factors
ONV75_06520 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
CDKN3
DUF5600
EarP
Motif
Other DBs
NCBI-ProteinID:
UZT08008
LinkDB
All DBs
Position
1:1408717..1410051
Genome browser
AA seq
444 aa
AA seq
DB search
MYKVGIISLGCDKNRVDSEIILGNMSRDYTITNNPKEADILIVNTCGFIESAKQESIDTI
LEMADYKVNYKCKLLIATGCLIQRYSEELGKLIPELDLMLGVNDYDKINSVITNFINGNE
KKEGLVNYTDEGINEGSRILTTQKGSAYIRIAEGCNNFCTYCIIPKIRGKFRSRKMENIL
KEAEELASQGIKELILIAQDTTMYGSDIYEKKNLHELLSELSKIEGIEWIRVLYCYPEEI
YDELIDEMAQNNKVVKYLDLPIQHISNHVLKLMGRKTTKEAILKKIDTLRERIPGMIIRT
TFIVGFPQETEEDFNEIKDFLQDYKLEKVGVFTYSQEENTPAARMDGQIDEEVKKQREKD
LMLLQKGISEKINELKIGKIYDILVEGYDGEDYRGRSYEMAPEIDAEVFFKCNDNLEIGT
FVKVKITKSMDYDLLGVVVDESCK
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagttggaataataagtttagggtgtgataaaaacagagtagattctgaaata
atccttgggaacatgagcagggattatacaataacaaataatcctaaagaagcagatata
ttaatagtaaatacatgtggatttatagaaagcgctaagcaggaatctattgatacaata
ttagaaatggctgattataaagttaattataaatgtaagcttcttattgcaactgggtgt
cttatccaaagatacagtgaagaacttgggaaacttattccagaattagatcttatgctt
ggagttaatgattatgataaaattaatagtgttataactaattttataaacggcaatgag
aaaaaagaaggtcttgtaaactatacagatgaaggtataaacgaaggaagcagaattctt
actacacaaaagggaagtgcatacataagaatagctgaaggatgtaataacttctgtaca
tactgtataattcctaaaataagaggaaaattcagaagtagaaaaatggagaatatatta
aaggaagcagaagaacttgcatctcaaggaattaaggaattaattcttatagcgcaagat
acaactatgtatggaagtgacatatatgaaaagaaaaatcttcatgaactattaagtgaa
ttatctaaaatagaaggaatagaatggataagggtcctttattgctatccagaagaaata
tatgatgaacttatcgatgaaatggctcaaaataataaagtggttaaatatttagatctt
ccgatacaacatataagtaatcatgttttaaaacttatgggaagaaagactactaaagaa
gcaatacttaaaaaaattgatacattaagagaaagaatacctggaatgataataagaact
acatttatagtaggatttccacaagaaacagaagaagattttaatgaaataaaagatttt
ttacaagattataaacttgaaaaagtaggagtgtttacatattcacaggaggaaaataca
cctgctgcaagaatggatggacaaatagatgaagaagttaaaaagcaaagagaaaaagat
ttgatgcttttacaaaaaggtatttcagaaaaaataaatgaattgaaaattggcaaaata
tatgatattcttgttgaaggatatgatggagaagattaccgtggaagaagctatgagatg
gctcctgaaatagacgcagaggtattttttaagtgtaacgataatcttgaaataggtaca
tttgttaaagtaaagataacaaagagtatggattatgatttattaggagttgtggttgat
gaatcttgcaaataa
DBGET
integrated database retrieval system
