Clostridium sp. LQ25: ONV75_06535
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Entry
ONV75_06535 CDS
T10526
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
clol Clostridium sp. LQ25
Pathway
clol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ONV75_06535 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clol03019
]
ONV75_06535 (rny)
Messenger RNA biogenesis [BR:
clol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ONV75_06535 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
FeoB_associated
FUT8_N_cat
DUF7696
Motif
Other DBs
NCBI-ProteinID:
UZT07511
LinkDB
All DBs
Position
1:1412157..1413698
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AA seq
513 aa
AA seq
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MQLALMIIVDIVILAILGIVVYKSVQNTTKSKVESLEKEAEEVLKRAERDAEAKKKEAIL
EAKEELHRLRNDFDKESRDRRNEIQRLERRVIQREEALDKKSELLESKEQTINEKMLELD
QVEAKVQELYNERRAELERVAALSGEEAREILLDEIRKEITHDAALMIKDIESRAKEEAD
KKSREIITTAIQRCAADHVSETTVHVVALPNDEMKGRIIGREGRNIRTLETLTGVDLIID
DTPEAVILSSFDPIRREVARMALEKLIVDGRIHPARIEEMVERATKDVENSIKEEGEQAA
LETSVHGLHPEIIRLLGRLKYRTSYGQNVLKHSIEVSYLAGLMASELGLDVTLAKRAGLL
HDIGKAVDQEQEGPHALIGGDLAKKYHESPLVVNAIAAHHSDVEMQSLEAVLVQAADAIS
AARPGARRETLEAYIKRLEKLEEIANSYEGVEKSYAIQAGREIRIMVKPEKVDDVGTIEL
AHNLVKSVEEQLEYPGQIKINVIRETRAVDFAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
gtgcaactagcgttaatgataattgttgatatcgttatattagcaatattaggaatagtg
gtttataagtcggttcaaaatactacaaaaagtaaagtagaatcacttgaaaaagaagca
gaagaagttttaaagagagcggaaagagatgctgaagctaaaaagaaagaagcaatactt
gaagctaaagaagaacttcacagattaagaaatgattttgataaagaatctcgtgacaga
aggaatgagattcaaaggcttgagagaagagtaattcaaagagaagaagcacttgacaag
aaaagtgaacttctagaaagcaaagaacaaacaattaatgaaaaaatgcttgaattagat
caagtagaagcaaaggtacaggaactttataatgaaagaagagcagaacttgaaagagtt
gcagccctttcaggcgaagaagctcgtgaaattcttttagatgaaattagaaaagaaatt
acacatgatgctgcgttaatgattaaagacattgaaagcagagcaaaagaagaggcagat
aagaagtcaagagagattataactactgccattcaaagatgtgcagcagatcatgtgtca
gagacaactgtacacgttgttgccctaccgaatgatgagatgaaaggtagaataataggt
agagaaggaagaaacataagaaccttagaaacattaacaggagtagatttaattatagat
gatactccggaagcagtcattttatcaagcttcgatccaattagaagagaagttgctaga
atggcactagaaaagttaatagtggatggcagaatacatccagcaagaatcgaagagatg
gttgaaagagcaactaaggatgttgaaaatagtataaaagaagaaggggaacaagcggcc
cttgaaactagtgtacacggtttacatcctgaaattattagacttcttggtagattaaaa
tatagaactagttatggtcagaatgttttaaaacattccatagaagtttcatatttggct
ggcttgatggcttcagagctaggtttagatgttactctagctaaaagggcaggattgttg
catgatataggtaaagccgtagatcaggaacaagaaggtccacatgcattaataggtgga
gatcttgctaagaaatatcatgaatcaccattagtagtcaatgcaatagcagcccatcat
tcagatgtagaaatgcaatctcttgaagcagtattagttcaggcagctgatgcaatatca
gcagctagaccaggtgcaagaagagaaacattggaagcatacattaagaggttagagaaa
ttagaagaaattgcaaattcttatgaaggtgtagaaaagtcatatgccattcaagctggt
agagagattagaattatggttaaaccagaaaaagttgacgatgtcggtacaattgaatta
gcacataatctagttaagagtgtcgaagaacaacttgagtatccaggacaaattaaaatt
aatgttattagagaaactagagcagtagattttgcaaagtag
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