Clostridium sp. LQ25: ONV75_09380
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Entry
ONV75_09380 CDS
T10526
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
clol Clostridium sp. LQ25
Pathway
clol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ONV75_09380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clol03019
]
ONV75_09380
03009 Ribosome biogenesis [BR:
clol03009
]
ONV75_09380
Enzymes [BR:
clol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ONV75_09380
Messenger RNA biogenesis [BR:
clol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ONV75_09380
Ribosome biogenesis [BR:
clol03009
]
Prokaryotic type
rRNA helicases
ONV75_09380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Ribosomal_L32e
AAA_19
Cas3-like_C_2
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
UZT04805
LinkDB
All DBs
Position
1:complement(2017965..2019074)
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AA seq
369 aa
AA seq
DB search
MDFKKLGICKELVDILKKNGISAPTPIQEESIEIIKNGKDIIAEAGTGTGKTLAFLLPIF
EQINPKSKDVQALILTPTRELALQITNEADKLNEDKKINVLACYGGKDINSQLKKLNKNV
QLIVATPGRLLDHIERKTIDLKTVKTFVLDEADQMLFMGFKNEVEKIMEQMSKKKQMLCF
SATMDSAVKKLAYRYMNDPAIISVKKEEVDMHSIKQFVVETTDRQKRDALCKVLDEDNPF
MAIIFCRTKRRADDLETVMATRKYNCAKIHSDIAQNKRERIMKSFREAKLQYLIATDVAA
RGLDITGVTHIYNYDIPETPESYVHRIGRTGRAGESGITCMFVDPKNKRALEEIEDTIGF
KIPRRSVEL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaaaaacttggaatatgtaaagaattagttgatatattaaagaaaaatgga
attagtgcaccaactccaattcaagaggaaagcattgaaataataaaaaatggtaaagat
ataattgcagaagcagggacaggaactggaaaaacacttgcatttttactgcctatattt
gaacagataaatccaaaatccaaggatgttcaagcacttatacttacaccaacaagagag
cttgcacttcagataacaaatgaagcggataaattaaatgaagacaaaaaaataaatgta
cttgcatgctatgggggaaaagatataaattcacaacttaaaaagcttaataaaaatgtg
cagttaatagttgcaactccagggagattactagatcatatagaaaggaagacaatagat
ttaaaaactgtaaagacttttgttttagatgaagcagatcaaatgcttttcatgggattt
aagaatgaagttgaaaagataatggaacagatgtcaaagaaaaagcagatgctttgtttt
tcagcaaccatggattctgcagtaaaaaaacttgcatataggtacatgaatgatccagca
attatttcagtaaaaaaggaagaagttgacatgcattcaataaagcagtttgtagttgaa
acaactgacagacagaaaagagatgctttatgcaaagttcttgatgaagataatcctttt
atggctattatattctgtagaacaaaaagaagagctgatgatcttgaaacagtaatggca
acaagaaagtataactgcgcaaaaatacatagtgatatagctcaaaataagagagaaaga
atcatgaagtcatttagggaagcaaaattacaatatcttattgctactgatgttgctgca
agaggacttgatattacaggggtaactcatatttataattatgacattcctgaaacacct
gaaagttatgtacatagaataggaagaactggaagagctggtgaaagcggaattacatgt
atgtttgtagatcctaaaaataaaagggctttggaagaaatagaggatactataggattt
aaaattccaagaagatctgttgaactttaa
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