Clostridium sp. LQ25: ONV75_09595
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Entry
ONV75_09595 CDS
T10526
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
clol Clostridium sp. LQ25
Pathway
clol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ONV75_09595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clol03019
]
ONV75_09595
Messenger RNA biogenesis [BR:
clol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ONV75_09595
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Anti-Pycsar_Apyc1
RMMBL
Lactamase_B_2
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
UZT04848
LinkDB
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Position
1:complement(2081973..2083649)
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AA seq
558 aa
AA seq
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MINRTKIKSKVKVIPLGGLGEIGKNLTVFEYEEEIVIIDCGMSFPDEELLGIDIVLPDIT
YLLSNKDKIKGFFITHGHEDHIGGLPYILKQINVPIYATKLTLGLIESKLQEHNMISDCT
LNMVKPGDMLETGNFKIEFIRTNHSIADSVSIALHTPIGVIVHTGDFKIDFTPIDREVID
LQRYAQLGKKGVLLLMADSTNATRAGYTMSEKTVGEALDNLFTKADGRVIVATFASSVHR
VQQIANASIKYGRKIAFSGRSMERISEVAMSLGYLFIPEEIVIDLNDIKKYPNNKITIIT
TGSQGEPMAALTRIASGNHRSIQIEKGDMVIISSTPIPGNKKAVSNVIDDLTEKGAEVIY
EAIEDIHVSGHACEQELRLIHALLKPKFFVPVHGEYMHLLSHSKIAENMGMNKSNIFILE
IGNVFEVSKKNAQIVGNVPSGRVLVDGLGIGDIGNIVLRDRKNLAKYGIITVVIAINRES
RSIISGPDIITRGFVYVRDSEELIRGIKGIVSKCVERCLCNNVNQWSEIKSIIRKEVDNY
VYTKMKRKPMVLPVIIEI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgataaataggaccaaaataaaaagtaaagtaaaggttattccgctaggaggcttagga
gaaataggaaagaacttaactgtctttgaatatgaagaagagatagtaattatagattgt
ggaatgtcgtttccagatgaagagcttcttggaatcgacattgtacttcctgatataacg
tatttattaagcaataaagacaagataaagggatttttcataactcatgggcatgaagat
catatcggaggattaccctatattttgaaacaaattaatgttcctatctatgctacaaag
ttaactttaggattaattgaaagtaaactacaagaacataatatgattagtgactgcaca
ttaaacatggttaaaccaggtgatatgctagaaacaggcaattttaagattgaatttatt
agaacaaatcacagtatagcagatagtgtatcaattgctttacatacacctataggagta
atcgttcatactggtgattttaaaattgactttactccaattgatagagaagttattgat
ttgcaaagatatgcacagttaggaaaaaaaggagtactgcttttaatggctgatagtact
aatgctactcgtgcaggttatacaatgtcagaaaagactgttggtgaagctttagataat
ctttttacgaaagcagatggaagagttatagtagctacttttgcttcaagtgttcataga
gtgcagcagattgcaaatgcttctataaaatatggtagaaagattgcttttagcggaaga
agtatggaaagaatatctgaagtggctatgtcattaggatatttatttataccagaagaa
attgtaatagatttaaatgacataaaaaaatatcctaataataaaattacaataattaca
actggaagccaaggtgaaccaatggcagcacttacaagaatagcttcaggaaatcataga
agtattcaaatagaaaagggagatatggtaattatatcatcaactccaatacctggaaat
aaaaaagctgtgtctaatgttattgatgatttaacagaaaagggagcagaggtaatatat
gaagcaatagaagatatacatgtttcaggtcatgcttgtgaacaagaacttaggcttatc
catgcattattaaaacctaaattttttgtgccagtacatggagagtatatgcatttatta
agtcattctaaaattgcagaaaatatgggtatgaataagtcaaatatatttattttagaa
ataggcaatgtgtttgaagtatctaaaaaaaatgcacaaatagttggaaatgtgccatca
ggaagagttcttgtagatggattaggcattggagatatagggaatattgtactcagagat
agaaagaatttagcaaagtatggtatcataacagtagttattgctataaatagagaaagc
agaagtataatatctggaccagatattattacaagaggattcgtatatgttagagattca
gaagagttaattagaggtattaaaggtatagtttctaaatgtgtagagagatgtctttgt
aataatgtaaatcaatggtcggaaattaagagtattataagaaaagaagtagataattat
gtatatacaaaaatgaaaagaaagcctatggtattaccggtaattattgaaatataa
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