Clostridium sp. LQ25: ONV75_11060
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Entry
ONV75_11060 CDS
T10526
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
clol Clostridium sp. LQ25
Pathway
clol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ONV75_11060 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clol03019
]
ONV75_11060 (recQ)
03400 DNA repair and recombination proteins [BR:
clol03400
]
ONV75_11060 (recQ)
Enzymes [BR:
clol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ONV75_11060 (recQ)
Messenger RNA biogenesis [BR:
clol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ONV75_11060 (recQ)
DNA repair and recombination proteins [BR:
clol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ONV75_11060 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
ANAPC2
Motif
Other DBs
NCBI-ProteinID:
UZT05126
LinkDB
All DBs
Position
1:complement(2395124..2397574)
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AA seq
816 aa
AA seq
DB search
MINKSPQSVLEKYYGYKSFREGQENIINSIVQGRDVLAIMPTGGGKSICYQVPALMLEGL
TIVISPLISLMKDQVDTLKDMGVEAEYINSTLSSAEENDIINKIERNEVKILYIAPERLG
SSGFLNIIGRCSISQIAVDEAHCISQWGHDFRSSYKKISHFIGILNKRPTVTAFTATASE
EVRDDIIRLLKLENPKIFITGFNRENLFINIIKGGDKKNYLLDYINNNSDVSGIIYASTR
KEVDNIYELLSSKGYSVVHYHAGLSEEARRENQEGFIYDRANIMVATNAFGMGIDKPDIR
YVVHYNMPRNVESYYQEIGRAGRDGDKSECILLFSPQDVQIQKYLIETSIENPERQNIQY
KKLQQMIDFVYSNECYKKFILAYFGEELKDDCNSCSNCMNEGEVVDKTVDAQKVLSCIYR
MNQKFGSGMVVDVLRGSKNKKVLQFKFNELSTYGIMKEFSADELKTFINTLVSQGYIRVV
EGTYPILALNSMSRKILVGEEKVMLKEFAAHKKVRENNELFEILKELRKEIAHENNVPPY
VIFGDITLKEMSVKYPVYKEAMLNITGVGELKYSKYGELFENTIRKYSEDNNIKISGEGT
LEIITSNNDNDLKLEIKTDDKLYNLLFEARKKWAEKEKNAYPQSIMHMNILKEISGRYPV
SIEELKDISGFGPKKIEAYGDEIIEIVNNYILENNIEHVWIQKNKRKVIIDGETRNSDQI
AVDMLKENVNIHEVSEKLELSVSTILGYVSEYIKEFGEIKFNINFEEFYNEEEESAILNA
INEVGFEKISDLKKALPKYTKYESIRAVILKHCILA
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgataaataaatcacctcaaagtgtattggaaaaatattatggatataaatcatttaga
gaaggtcaggaaaatataataaattcaatagtacagggtagagatgttctggctattatg
cctacaggtggtggaaagtccatatgttatcaagtgcctgcacttatgcttgaaggtctt
acaattgttatttcacctcttatatctttgatgaaagatcaagttgacacattgaaagac
atgggagttgaagcggaatatattaatagtacattaagttcagcagaagagaatgacata
ataaataaaattgaaagaaatgaagtgaaaatactttatatagctcctgaaagacttggc
tcatcaggatttttgaatattataggaagatgcagcatatcacaaattgcagttgatgaa
gcccactgtatttcacaatggggccatgattttagatcaagttataaaaaaatatcacac
tttataggtattcttaataaaagacctacagttactgcttttacagcaacagcatcagaa
gaagtacgagatgatattataaggttattaaaacttgagaatcctaagatatttataact
ggatttaatagagaaaatctttttataaatataataaaaggtggagataaaaagaattat
cttttagattatattaataataacagtgatgtttcgggaataatatatgcttcaacaaga
aaagaagtagataatatttatgagttactaagttctaaaggatatagtgttgtgcactat
catgcaggattaagtgaagaagctagaagagagaaccaagaaggttttatatatgataga
gcaaatattatggttgcaactaatgcatttggaatggggattgataaaccagatataaga
tatgttgtacactataatatgcctagaaatgtggaaagttattatcaggaaataggtaga
gcaggtagagatggtgataaaagtgaatgtatattattattttcaccacaggatgttcag
attcagaagtatttaattgaaacatcaattgaaaatcctgaaagacagaatatacaatat
aaaaagctccaacaaatgatagattttgtatacagtaatgaatgttataagaaatttata
ttagcttattttggagaagagcttaaagatgattgcaacagttgcagtaattgtatgaat
gaaggtgaagttgttgataaaacagtagatgcacagaaagttttatcatgtatatataga
atgaatcagaagtttggttctgggatggtagtagatgttttaagaggatcaaaaaataaa
aaagtattgcaatttaaatttaatgaactttctacctatggaataatgaaagaattttca
gcagatgaactgaaaacatttataaatactcttgtatctcaaggatatataagagttgtt
gaaggaacgtatcctattttagccttaaattcaatgtcaagaaaaatccttgtgggtgaa
gaaaaagtaatgcttaaagaatttgcagcacacaaaaaagttcgtgagaataatgagttg
tttgaaattcttaaagaacttagaaaagaaattgcacatgaaaacaatgttccaccatat
gttatttttggagatattaccttaaaggaaatgtcagttaaatatccagtttataaggaa
gcaatgcttaatattactggagttggtgaacttaaatacagtaaatatggtgagctattt
gaaaacacaataagaaaatattctgaagataataatataaaaatttctggcgaaggtact
ttggaaataataacatctaacaatgataatgatctgaagcttgaaataaaaacagatgat
aaattatataatttattatttgaagcaagaaaaaaatgggcggaaaaagaaaaaaatgcg
tatcctcaatctataatgcacatgaatattttgaaggagataagtggaagatatcctgtg
agtattgaagaattaaaagatataagtggatttggacctaaaaagatagaagcttatggt
gatgaaataatagaaatagtaaataattatatattagaaaataatatagaacatgtatgg
atacaaaaaaataaaagaaaagtgataattgatggagaaacaagaaatagtgatcaaatt
gcggtagatatgcttaaagaaaatgtaaatattcatgaagtatctgaaaaacttgaacta
tcagtttcaactatacttgggtatgtttctgaatatattaaagaatttggagaaattaag
tttaatataaattttgaagagttttataatgaagaagaagaaagtgccattttaaatgca
ataaatgaagttggttttgaaaaaatatcagatttaaaaaaagctctgcctaaatataca
aaatatgaaagtataagagctgttatattgaaacattgtattttagcttaa
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