Clostridium sp. LQ25: ONV75_15935
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Entry
ONV75_15935 CDS
T10526
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clol Clostridium sp. LQ25
Pathway
clol03420
Nucleotide excision repair
clol03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ONV75_15935
03430 Mismatch repair
ONV75_15935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clol03400
]
ONV75_15935
Enzymes [BR:
clol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ONV75_15935
DNA repair and recombination proteins [BR:
clol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ONV75_15935
MMR (mismatch excision repair)
Other MMR factors
ONV75_15935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
SLFN-g3_helicase
DEAD
AAA_30
PhoH
UvrD_C
Viral_helicase1
AAA_11
AAA_14
UvrD_C_2
ResIII
nSTAND3
NB-ARC
CbiA
NPHP3_N
NACHT
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UZT06072
LinkDB
All DBs
Position
1:complement(3525694..3527871)
Genome browser
AA seq
725 aa
AA seq
DB search
MSGQIDFLMEENKLNEIKEILNEEVLKYLERRKLVTNQMLEARKKYIEEYKDDEDQVIDY
FDHENYVTEESYKTIDKRLMEFTKLKESPYFGKVTFKEEDSLPEDIYVGRYGLTLEDAYE
PLIVDWRAPIASLFYKGSVGPSSYNPPSGEIKADILSRKQLIIKKGELKGVFDSALDVKD
EILQMVLTSNSSEKLKDIVMTIQKEQDEIIREERNKIVVVNGVAGSGKTTIALHRISYLL
YNFRKQFGDKVLIFGPNDIFMDYIAQVLPTLGESGGIKQTTFENFAKRELNLENENIKSF
GKYIEDAMNDNHEALEEYKYKSSKKFVEVLDSKIKELNEDYFKIQPVIFNNEEIVSVSEV
EDLFNNYYKDMPLFRRSEKVRRILTSKIKDKRDEAVYKLNEEIKDKAKNLSQDEADIEKN
NLEFLRRIKIREIVREVINSRKTLDNWLKIEPIIDIYKRIISGESINKPDSAFDPEAIIE
SSNKNYIELGYMDLSGILYLMVKLEGLKIKDDIKHIVIDEAQDYSYMQFEIIKEVTKCSS
YTIVGDSNQRLITTDDEPAMLHLDEVFGDMKTEIKKYDLNKSYRSTQEIMEYANRFLKED
RIVPLVRKGEAVFEEETENAEDCIETMLSIIEDYEEDGYENIAVIFSNTHDLEEYAPILK
QRIGIQNLDNEDILYKGGKVIIPAYLAKGLEFDAVIIVENNNVQPLVKYIMCTRALHRLS
VIKNI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagcggacagatagattttttaatggaagaaaacaagttaaatgaaataaaggaaata
ttaaatgaagaagttttaaaatatttagaacgaagaaaattagtgacaaatcaaatgctt
gaagcgagaaagaagtatattgaggagtataaggatgatgaagatcaggttatagattac
tttgaccatgaaaattatgttacagaagaatcttataagactatagataaaagacttatg
gaatttactaaacttaaagaatcaccttactttggaaaagttacttttaaagaagaagac
agccttcctgaggatatttatgttggaagatatggattaactctagaagatgcatatgaa
cctttaatagttgactggagagcgcctattgcttcactattctataaaggatcagttgga
ccatcaagctataatccaccttcaggagaaattaaagctgatattttatcaagaaagcag
cttataataaaaaaaggtgagttaaaaggtgtatttgattcagcccttgatgttaaggat
gaaatacttcaaatggttttaacaagtaattcatcagaaaagcttaaagatattgttatg
acaattcaaaaagaacaagatgaaataataagagaagaaagaaataaaattgtagtagta
aatggtgtagctggttctggtaaaacaacaattgcattacatagaatatcgtatcttctt
tataattttagaaaacaatttggtgataaggttcttatctttggaccaaatgatatattt
atggattatatagctcaagtacttccaacactaggtgaaagtggaggcattaagcagact
acttttgaaaactttgcaaaaagagaacttaatttagaaaatgaaaacataaagagtttt
ggaaaatatattgaagatgcaatgaatgataatcatgaggctttagaagaatacaaatat
aagagttctaaaaagtttgtagaagtacttgattctaaaattaaagaattaaatgaagat
tattttaaaattcagcctgttatcttcaacaatgaggaaatagtttctgttagtgaagta
gaagatttatttaataattattataaggatatgcctttatttagaagaagtgaaaaggta
agaagaatccttacatctaagattaaggataaaagagatgaagctgtttataaacttaat
gaagaaataaaagataaagctaagaatctttcacaagatgaagctgatatagaaaagaac
aacttagagtttctaagaagaataaaaataagagaaattgtaagagaagttattaattct
agaaaaactcttgataactggcttaagattgaacctataatagatatttacaagagaata
ataagtggagaaagtataaacaaacctgactctgcttttgatcctgaagctataatagaa
tcatcaaacaagaactatattgagcttggatacatggatttaagcggtatactttattta
atggttaaacttgaaggattaaaaattaaggatgacattaagcatatagtaattgatgaa
gcacaggattatagttatatgcagtttgaaataataaaggaagtaacaaaatgtagcagc
tatacaattgtaggagattcaaatcaaaggcttataacaactgatgatgaacctgcaatg
cttcatttagatgaagtttttggtgatatgaagactgaaataaagaagtatgatttaaat
aagagctatagatctacacaggaaataatggagtatgcaaatagattcttaaaggaagac
cgtattgtacctttagttagaaaaggtgaagctgtctttgaagaagaaacagaaaatgca
gaagattgtatagaaactatgctttcgattattgaggattacgaagaagatggatatgaa
aatattgcagtaatatttagcaatacacatgacttagaagaatatgcaccaattttaaaa
caaagaataggaatacaaaaccttgataatgaagatattctttataaaggtggaaaagta
atcatacctgcatatcttgcaaaaggattggaatttgatgctgtaataatagttgaaaat
aataatgttcagccattagtgaaatatataatgtgcacaagagcacttcacagactttca
gtaattaaaaatatataa
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