Clostridium sp. LQ25: ONV75_16405
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Entry
ONV75_16405 CDS
T10526
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
clol Clostridium sp. LQ25
Pathway
clol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ONV75_16405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clol03400
]
ONV75_16405
Enzymes [BR:
clol01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ONV75_16405
DNA repair and recombination proteins [BR:
clol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ONV75_16405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
Viral_helicase1
SH3_13
RsgA_GTPase
AAA_11
AAA_22
PIF1
WHD_HELB
AAA_14
ABC_tran
MMR_HSR1
YflT
FtsK_SpoIIIE
DEAD
NPHP3_N
NACHT
NAT10_TcmA_helicase
AAA_29
NB-ARC
RNA_helicase
AAA_16
GTP_EFTU
AAA_12
Motif
Other DBs
NCBI-ProteinID:
UZT06162
LinkDB
All DBs
Position
1:complement(3623202..3625103)
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AA seq
633 aa
AA seq
DB search
MTKKRDTSIRKYNLEKHIRKHIKVNRKILKEASKDKVLRDIFNEDTLSILLRSYPDEIKQ
DINKLDVSNKKSIFNTIRKYRNKNFIDMMIKNAEIIVDEECFDYIKKIKNEDVDVFLQKN
IYLLARYKTNLEKIKKLFMIDNYENTLLFNILKELHKNEENGHVYIERNFLYDKLRDKNN
YAINDFNEAINKLIDKKIIIDDNCKIYFKELYEAECMLAKNLKQRLKLNMQLDNSICKKI
DTFIKSNNINKDGKNAIYNVFQNNISIICGQAGTGKSTLINRIIKSINSISANTEDIKLL
SYTGKAVSRLNAEDLDIVANTIHKFLGIKENDKFEIKLVNEKVDYLIIDEASMLDLKLMS
VVLNSVPISARIILVGDIYQLQPIKAGSPFLDIFNSNLFAKTELTKIYRYSNKGIILNNA
LAIRNKDLKGIVEDEDFKILKYNSYTIFSDTMNEIDKLLKEQYLLEDIMILGTNNKLIDD
MNKYISTQLNKNNLINGKRFNIADKVIQTKNNYSKDIYNGDTAIITSKINFNGQQVIKVK
FDNKLDEVTYVNNEIDELNRAYALTIHKFQGSECKIIIIIIPNKTELYNSLLYVAVTRAR
EKVIVISNEKYFYNAINKSNPLRNGHLLERVQN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgactaagaaaagagatacaagcattagaaaatataatttggaaaagcatataagaaaa
catataaaagtaaatagaaaaatattaaaagaagccagtaaagataaagtattaagggat
atttttaatgaagatacactaagtattttgttaagaagttatccagatgaaattaagcaa
gatataaataaattagatgtaagtaataagaagagtatttttaatactataagaaaatat
agaaataagaattttatagatatgatgattaaaaacgcagaaattatagtagatgaagaa
tgttttgattacataaaaaaaataaaaaatgaagatgtagatgtgttcttacaaaaaaat
atatatttacttgcaagatataaaaccaatttagaaaagataaaaaaattatttatgata
gataattatgaaaatacattattgtttaatatcttaaaagaactacataaaaatgaagaa
aatggacatgtttatatagaaagaaatttcctatacgataagttaagagataaaaataat
tatgcgattaatgattttaatgaagctataaataaattgatagataaaaagattataata
gatgataattgtaagatttactttaaagaattatatgaagctgaatgtatgttagctaaa
aatctaaagcaaagattaaaattaaatatgcaattagataatagtatctgtaaaaaaata
gatacatttattaaatctaataatataaataaagatggtaaaaatgcaatatataatgtt
tttcaaaataatatatcaatcatttgtggtcaggctggtacaggaaaatctacattaatt
aatagaataattaagagcattaatagtatatctgcaaatacagaagatattaaactttta
agttatactggaaaagctgtgagtaggttaaatgcagaggacttagatatagtagctaac
actattcataaatttttgggaataaaagaaaatgataaatttgagataaaattagttaat
gagaaggtagattatcttataatagacgaagcatctatgctcgatttaaaacttatgtcg
gtagtgttaaatagtgtacctatcagcgcaaggattattttagtaggagatatataccag
ttacaacctattaaagcaggttctccttttttagatatttttaatagtaatttatttgct
aaaacagaattaaccaaaatatatagatacagcaataaaggaattattcttaacaatgct
ctagctattagaaataaagatttaaaaggtatagtagaggatgaagattttaaaatattg
aaatataattcttatactatattttcagatactatgaatgaaattgataaattattaaaa
gaacagtatttgttagaagatataatgattttaggcactaataataaattaattgatgat
atgaataagtacataagtacacaattaaataaaaataatttaataaatggtaaaagattt
aatatagcagataaggtaattcagacaaaaaataattattctaaagatatttataatgga
gatacagcaataataacatctaaaattaattttaatggacagcaggttataaaagttaaa
tttgataataaattagatgaggttacatatgttaataatgaaattgatgagttaaataga
gcttatgcattaactatccataaatttcaaggaagtgaatgcaaaattataataattatt
ataccgaataagactgaattatataatagtcttttatatgttgcagttactagagcgaga
gaaaaagtaattgttatatctaatgaaaagtatttttataatgcaattaataaaagtaat
cctttaagaaacggacatcttttggagagagtacaaaattaa
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