Clostridium sp. LQ25: ONV75_16695
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Entry
ONV75_16695 CDS
T10526
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
clol Clostridium sp. LQ25
Pathway
clol03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ONV75_16695 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clol03400
]
ONV75_16695 (uvrB)
DNA repair and recombination proteins [BR:
clol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ONV75_16695 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ONV75_16695 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
SWI2_SNF2
AAA_22
DUF87
DUF4288
AAA_5
AAA_16
NPHP3_N
UFL1
Motif
Other DBs
NCBI-ProteinID:
UZT06217
LinkDB
All DBs
Position
1:complement(3686190..3688163)
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AA seq
657 aa
AA seq
DB search
MGEFKIHSKFKPTGDQPQAIEKLIDSINNDHRGQTLLGVTGSGKTFTMANIIERLQRPTI
VLAHNKTLAAQLCSEFKEFFPDNIVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEIDK
LRHSATSALFERRDVIIVASVSCIYGLGNPDEYKKLTLSLRTGMEKERNEIIKKLVEIQY
ERNDIDFSRGTFRVRGDSLDIIPASYSNKGIRIEFFGDEIDRIREFDVLTGSIIGDRNHV
AITPASHFATSKETVDRAIGKIEDELEERLRELNSQDKLLEAQRLRQRTNYDIEMIKEMG
YCSGIENYSRILDGRDSGTPPKTLLDYFPEDFLMFIDESHVTLPQVRAMYAGDRSRKNTL
VDYGFRLPCAYDNRPLKFEEFEKKIKQVVFVSATPSQYELDNSEEIAEQIIRPTGLLDPE
IVIRPVTGQIDDLYGEINKTTERGFRTLVTTLTKRMAEDLTKYLTELGVKTTYMHSEIDT
IERMKIIKDLRTGEFDVLVGINLLREGLDIPEVALVAILDADKEGFLRSETSLIQTIGRA
ARNSESRVIMYADNITKSMNKAIKETERRREIQTKYNEEHGITPTTIIKDVRDVIEATKV
AEDTAEYKTDENKKLTKKQRDKLIKEYTNEMMLAAKNLQFERAAELRDIIKQLTSNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
gtgggagagtttaaaattcattcgaaatttaagcctacaggtgatcagccacaggctata
gaaaaacttatagattcaataaacaatgatcatagaggccagacacttcttggagtaact
ggatctggaaagacttttactatggctaacattatagagaggcttcagaggccaaccata
gtacttgcacacaataagactcttgcagcacagttatgttcggaatttaaagagtttttt
ccagataatatagttgagtatttcgtatcttattatgattattaccaaccagaagcatat
gtaccacagactgatacttttattgaaaaggatgcatctataaatgatgaaatagataaa
cttcgtcactctgcaacatcggcattgtttgaaagacgtgatgtaataatagtggcatca
gtttcatgtatatacggacttggtaatccagatgaatataaaaagcttacgttgagttta
aggactggaatggaaaaagaacgtaatgagataataaagaaactagtagaaatacagtac
gagagaaatgatattgatttttcaagaggtacatttagagtaagaggagattctttagat
attattccagcatcatattcaaataaaggcataagaattgaattttttggagatgaaata
gacaggataagagaatttgatgtacttacaggaagtataattggagatagaaatcatgtt
gcaataactccagcttcccactttgctacatctaaagaaaccgtagacagagcaataggg
aaaattgaagatgaacttgaagaaagattaagagaacttaattctcaagataagcttttg
gaagcacaaagactaagacagagaacaaattatgatattgaaatgataaaagaaatggga
tactgtagtggaattgaaaattattcaagaatactagatggcagagattcaggaacacca
ccaaaaactctcttagattacttcccagaagatttcttaatgttcatagatgaaagtcat
gtaacacttccacaggttagagctatgtatgcaggtgatagatcaagaaaaaatacatta
gttgattatggattcaggcttccttgtgcatatgataataggcctttaaagtttgaagaa
tttgaaaagaagataaagcaggttgtatttgtcagtgcaactccttctcagtatgaactt
gataattctgaagaaatagctgaacagataataagaccaactggactccttgatccagaa
attgtaataagaccagtaacaggacaaattgatgatttatatggtgaaataaataaaaca
acagaacgtggattcagaactcttgtaacaacacttacaaaacgtatggcagaagacctt
actaagtatcttacagagcttggagtaaagactacttatatgcactctgagattgacact
atagaaagaatgaaaataataaaagatttaagaactggagaatttgacgtacttgttgga
atcaatcttttaagagaaggacttgatataccagaagttgctcttgttgcaattttagat
gcagataaagaaggatttttaagatctgaaacatcattaatccagacaataggaagagca
gcgagaaattcagagagcagagttataatgtatgcagataatataactaaatcaatgaat
aaggcaattaaagaaacggaaagaagaagagaaattcaaacgaaatataatgaagaacat
ggaataactcctactacaataattaaggatgtaagggatgttatagaagctacaaaagtt
gcagaagatactgcagaatataaaactgacgaaaataagaagcttactaagaaacaaaga
gataagcttattaaagaatatacaaatgaaatgatgcttgcagcaaagaacttacaattt
gagagagcggcagaacttagagacataattaaacagttaacaagtaacagttaa
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