Clostridium sp. MF28: AXY43_00410
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Entry
AXY43_00410 CDS
T11014
Name
(GenBank) LacI family transcriptional regulator
KO
K26609
LacI family transcriptional regulator, galacturonate utilization repressor
Organism
clom Clostridium sp. MF28
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clom03000
]
AXY43_00410
Transcription factors [BR:
clom03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AXY43_00410
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
Peripla_BP_4
HTH_3
HTH_23
HTH_38
HTH_31
HTH_7
Crp
NUMOD1
MarR_2
HTH_10
MarR
HTH_Tnp_ISL3
HTH_IclR
HTH_Crp_2
HTH_50
Sigma54_DBD
Xre-like-HTH
HTH_24
Phage_terminase
TetR_N
Sigma70_r4
HTH_5
SpoIIID
HTH_AsnC-type
HTH_6
HTH_17
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AVK46602
LinkDB
All DBs
Position
99521..100519
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AA seq
332 aa
AA seq
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MATTIKDIAKALGISHSTVSRVLTGSKSVNEKTKEAVLNAVKELNYIPNMNARSLKIDKA
YNIGVFFSTISNGTSPFVFQTVINNVYKNIDKKYNVIVKGIDMYEKNTINPKNYDGILVV
SQKIDDDDFIREILEKEIPIVVINRKVNHDVINVYTDESVGVYKGVEELIKKGHKDIAII
EGAINFDSTKMRRDGYLKAFNNYNIKLDKNLVLNGNFTVKSGYEKANELIEMNEKFSAIF
AFNDEMATGAIKAITEYGLRVPEDISILGFDGNEIGRFITPSITTIKRPIGEIARIATEL
LLRLLNNEQDITTKKIYIESELELGNSIKDLN
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggctactacgattaaagatatagcgaaagcactaggaatatcacattcaactgtttca
agggtactgactggatctaaatctgtaaatgaaaagaccaaagaggcggtacttaatgca
gttaaagagctaaactatattcctaatatgaatgcgaggagtttaaagatagataaagct
tataatattggtgtatttttttcaactataagtaatggaacctcaccatttgtatttcaa
actgttataaataatgtctacaagaatatagacaaaaagtataatgtcattgttaaagga
atagatatgtatgaaaaaaatactataaatcctaaaaattatgatggaatactagtagta
agtcaaaaaatagatgatgatgattttattagagaaatattagagaaagagatacctatt
gtagtcataaatagaaaggtaaatcatgatgttataaatgtatatacagatgagagtgtt
ggggtgtataagggagtagaggaattgataaaaaagggtcataaggatattgcaataata
gaaggcgcaatcaatttcgattcaactaaaatgaggcgagatggatacttaaaggctttc
aataactataatattaaattggacaaaaatctggtgctaaatgggaactttactgtcaaa
agtggatatgaaaaagctaatgaattaatagaaatgaatgaaaagttttcagccatattt
gcttttaatgatgaaatggcaactggggcaataaaagctattacagagtatggattaagg
gttccagaagatatttcaatactaggatttgatgggaatgaaattggcagatttattact
ccaagtattacaacaattaaaaggcctataggagaaatagcaagaattgctactgaacta
cttttaagattgctaaataatgaacaagatataacaactaagaaaatatatatagaatca
gaattggaattaggtaattcaattaaagatttaaattag
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