Clostridium sp. MF28: AXY43_00845
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Entry
AXY43_00845 CDS
T11014
Name
(GenBank) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
clom Clostridium sp. MF28
Pathway
clom00900
Terpenoid backbone biosynthesis
clom01100
Metabolic pathways
clom01110
Biosynthesis of secondary metabolites
clom03010
Ribosome
Module
clom_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AXY43_00845
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AXY43_00845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
clom03011
]
AXY43_00845
Enzymes [BR:
clom01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
AXY43_00845
Ribosome [BR:
clom03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AXY43_00845
Bacteria
AXY43_00845
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LYTB
S1
S1_RRP5
Spt6_S1
S1_2
DUF7231
CENP-M
Motif
Other DBs
NCBI-ProteinID:
AVK46681
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All DBs
Position
206902..208809
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AA seq
635 aa
AA seq
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MSKVILAKNSGFCFGVQRAVNEAIRIQKEHNSKIYTLGPLIHNNDVVKYLEENNIFSIEF
EEIDKLNKGDTIVIRSHGVSETVLDTLEQKELKVINATCPFVANIQKKVKKYSKEGYHIV
ILGDKNHPEVIGINGWCDDKAIITKDGTFDEENMPHKVCVVSQTTEKMKNWEETLKNLSY
AREILAFNTICAATDVRQRSTNKISQKTDAMIVIGGKNSSNTTKLYQIAKENCENTIHIE
NAKDLPISFIKNNNINKIGVTAGASTPDWIIREVLDIMNTENNNFEDQLSLMNELDKRFV
IGDEVQGEILSKTRDSVIVSLVGYKSDGVIPFTELSAKEDPLTFADKLNIGDTINAKVIK
LQNNDGYVVLSRLEYEREEAFKELEKIYSEGTTFEVNVKEAREKGIVADYKGARIFIPAS
QIDIKFTKDKSEYVGKKLEVKLIDFSLKNPVKLVASRRVLLEESKNSEDAKAWESFNLGD
VIKGEVKRFTDFGAFVEVNGIDGLLHLSQISWNHIKKVSDVLKEGQIIDVKIIGLDKEAK
KLSLSIKELVAKPWDNAKEKYPEGSIVLGKVVRLNDFGAFVELEPGVDGLVHISKISHNR
IEHPFEVLKIGEEIKAKILSVDEENKRISLSIKDV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagttattctagcaaaaaattcaggtttttgctttggagttcaaagagctgta
aatgaagctatacggattcaaaaagaacataattcgaaaatctatactttaggtccttta
atacataataatgatgtagtaaaatatttagaagaaaataatatattttctatagaattt
gaagaaatagataaattaaataaaggggatactattgttataagatctcatggtgtatct
gaaacagttttagatacacttgaacaaaaggaactaaaagtcataaatgcaacttgtcct
tttgttgctaatattcaaaaaaaagttaagaaatattcaaaagaaggatatcatatagta
atattaggagataaaaatcatccagaagtcattggaattaatggatggtgtgatgataaa
gcaattatcactaaagatggtacttttgatgaagaaaatatgccgcataaggtatgtgtt
gtatctcaaacaactgaaaagatgaagaattgggaagaaacactgaaaaacttaagttat
gcaagagaaatattagcttttaacacaatttgtgcagctactgatgttagacaaagaagt
acgaataaaatatcccaaaaaacagatgctatgatagttattggcggaaaaaatagttcg
aatactactaagttatatcaaattgctaaagaaaattgtgaaaatacaattcatattgaa
aacgcaaaagatctaccaataagttttataaaaaataataatataaacaaaataggagtt
acagctggtgcatcaacaccagattggattattagggaggtactagatattatgaacaca
gaaaataataattttgaagatcaattatcattaatgaacgaattagacaaaagatttgtt
attggcgatgaggtacaaggagaaatactttcaaagactagagattcagttatagtttca
cttgttggatacaagtcagatggagtgattccatttacagagttatctgcaaaagaagat
ccactaacatttgcagataaacttaatataggtgatactattaatgcaaaagttataaaa
ctacaaaataatgatgggtatgtagtattatcaagattagaatatgaaagagaagaagct
tttaaagaacttgaaaaaatatattcagaaggaacaacatttgaagttaatgttaaagaa
gctagagaaaaagggatagtagcagattataagggagctagaatatttattccagcatca
caaattgacataaagtttactaaagataaaagtgaatatgttgggaagaaattagaagtt
aaattgatagatttttctctaaagaatcctgtaaaattagttgcttcaagaagagtttta
ttagaagaaagcaagaattctgaagacgcaaaagcttgggagagttttaatcttggggat
gttataaaaggtgaagtaaaaagatttacagactttggagcttttgtggaagtcaatggt
atagatggattattacatttatcacaaatttcttggaatcatatcaaaaaggtaagtgat
gtattaaaagaaggtcaaattattgatgttaagatcattggtcttgataaggaagctaaa
aagctatctttaagcattaaagaacttgtagctaagccttgggataatgctaaagaaaaa
tatccagaagggtctattgtacttggtaaagtagttagattaaatgattttggtgctttt
gtagaattggaaccaggagtagatgggttagttcatatatcaaagatatctcataataga
atagagcacccttttgaagttttaaaaattggtgaagaaattaaagctaagatattaagt
gttgatgaagaaaataaaagaataagcttaagtataaaagatgtataa
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