Clostridium sp. MF28: AXY43_01940
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Entry
AXY43_01940 CDS
T11014
Name
(GenBank) ABC transporter
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
clom Clostridium sp. MF28
Pathway
clom02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AXY43_01940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clom02000
]
AXY43_01940
Transporters [BR:
clom02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AXY43_01940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
nSTAND3
AAA_29
MMR_HSR1
AAA_22
AAA_14
AAA_25
AAA_18
RsgA_GTPase
DUF87
HisKA_4TM
AAA_19
DUF4635
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AVK46882
LinkDB
All DBs
Position
475472..477205
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AA seq
577 aa
AA seq
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MTLFKNYIAKQWKLLLLPMFAMIVSICADSSYPYFQKIFIDNIILGHMDNYLIIFLIVVA
SVALTHGLFSYLNEYLFDKFALIVCKKLRQDLYSKFQSFEFSFFDNNNTGELLSRIIEDV
DVVWDTLSFGLRLLLEAIILFSVSAFIMFNINKTLTIICLLVLLPVAYIGTIMDKKFWTV
YSQISDQTAEINSIVQQDVSGIRLVKAFAREKYEISKFLKVNKKFFDLNVEQAKIVGTYG
PIIELLTNAAPILMIVYGGYLCIQGNLSFGSLVAFTSYIFNLSWCVKNLGFFINLLSQNK
ASMGKITDILDRNSEITSKENGYNPTEVKGDIIFKNVSFSYNNVEVLHDINLNIPHGSAV
AIMGTTGCGKSTLLSLIGRYYDVTKGEILVDNVNVKNWNLETLRANMSVVFQDTFLFSDT
IKNNIDFGSDKSESALIKAVKDSAAYSFIKEMPEGFDTIIGERGLGLSGGQKQRLAISRA
ILRKSPILILDDSTSALDMETEFKVLQNLKNDKKKATTFIIAHRISGVKDADIILFMKDG
RIVEKGDHSSLVKAKGYYHSVYSHQFQDFEALTLEAN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgaccttatttaaaaattacattgcaaaacaatggaaattattacttttgcctatgttt
gctatgatagtttccatctgtgcagatagctcttatccttactttcaaaagatatttatt
gataatataattcttggtcatatggataattatttaattatatttttaatagttgttgct
tcagttgcgctaactcatggtttattttcttacttaaatgagtatttgtttgataaattc
gctcttatagtgtgtaaaaaattgagacaagatttatactctaaatttcaatcttttgaa
ttctcttttttcgataataataacactggtgaattactttcgagaattattgaagatgta
gatgtagtatgggacactctatcctttggactgagattgctattggaagcaataatactt
ttttcagtttctgcctttataatgtttaatataaataaaactttaactattatctgctta
cttgttttattacccgttgcttatattggaacaattatggacaagaagttctggactgta
tattcacaaattagtgaccaaacagcagaaataaactctatagttcagcaagatgtttct
ggtatcagacttgtaaaagcttttgctcgtgaaaaatatgaaatatcaaaatttttgaaa
gtaaacaaaaaattctttgatttaaatgttgagcaagcaaaaatagttgggacttatggt
cctataattgaacttttaacaaacgctgcaccaattttaatgattgtttatggtggttat
ttatgtattcaaggaaatttaagttttggtagtttagtagcatttactagttatattttt
aatctttcttggtgtgtaaagaatttaggcttttttattaacttactttcacaaaataaa
gcttctatgggtaagataactgatattttagatagaaattctgaaattacttccaaggaa
aatggttataaccctactgaagttaaaggagatattatatttaaaaatgtaagcttttcc
tataacaatgttgaagtacttcatgatataaatttaaatattcctcacggaagtgctgtt
gcaataatgggtaccactggatgtggtaaaagtacattactttctctaataggcaggtat
tacgatgtaactaaaggagaaattttagttgataatgttaatgttaagaactggaactta
gaaactttaagagctaatatgtctgttgtatttcaagatactttcttattttctgataca
ataaaaaacaatatagactttggaagtgataaatctgaaagtgccttaattaaagctgtt
aaagatagtgctgcttactcctttattaaagaaatgccagaaggttttgataccattatt
ggtgaaagaggccttggcctatcaggaggccaaaaacaaagacttgctatatcaagagca
atattaagaaaatcacctatcttaattttagatgattcaacttctgctctcgatatggaa
actgaatttaaagttcttcaaaatctaaaaaatgataagaaaaaagcaactacctttata
attgctcataggatttctggtgtaaaagacgctgatataattctatttatgaaagatggt
cgaattgtagaaaaaggtgatcattcaagtttagtaaaggctaaaggttactatcatagt
gtatattctcaccaatttcaagattttgaagcacttacattggaggcgaattaa
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