Clostridium sp. MF28: AXY43_02140
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Entry
AXY43_02140 CDS
T11014
Name
(GenBank) RNA polymerase subunit sigma
KO
K03093
RNA polymerase sigma-I factor
Organism
clom Clostridium sp. MF28
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clom03021
]
AXY43_02140
Transcription machinery [BR:
clom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AXY43_02140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Vhr1
Motif
Other DBs
NCBI-ProteinID:
AVK46916
LinkDB
All DBs
Position
complement(532611..533363)
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AA seq
250 aa
AA seq
DB search
MSDSKLFYDDTKDNKSIYGYIERIRNGDVKLKDKLIKEYLPFIGKSVSKVSKKYEDIRYS
DIFSIGMIAFNEALDNYDENKGKNFFAYCDMIIRSRIIDYYRKSEKEEKAYPFTYFENED
EINFEEKYLRSNSFNQYENIETQDEMEFFQKKLSEFNINIYDIGEEIPKHRDSIIMCIKI
AKELCDNDYLYGKLIRNKSIPLKELVSMVQVHKRTIERNRKFIIVVSLIFKTEFTYSKEY
IQDFFNGSNV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagatagtaaactattttatgatgatactaaagataacaaatcaatatatggatac
atagaaagaattagaaacggtgacgttaaattaaaagataaattaataaaagagtattta
ccatttataggtaagtctgtgtctaaagtatcaaaaaaatatgaagatataaggtacagc
gatatatttagtataggaatgatagcttttaatgaggcgttagataattatgatgaaaat
aaaggaaaaaactttttcgcttactgtgacatgataataagaagtagaattatagattat
tatagaaaaagtgaaaaagaagaaaaagcatatccatttacttattttgaaaatgaagat
gaaattaattttgaggaaaaatatttaagatctaattcatttaatcaatatgagaatata
gaaacacaggatgaaatggaattctttcaaaaaaagttgagtgagtttaatataaacata
tatgatattggagaagaaattcccaaacacagggactctattattatgtgtataaaaatt
gcaaaagaattatgtgataatgattacttatatggaaaattgattcgaaataaatcaatt
ccgttaaaggaattagtgtcaatggttcaggtacataaaagaaccattgagagaaatagg
aaattcataattgtagtaagcttaatatttaaaacagaatttacgtattcaaaggaatat
atacaagatttttttaatggatctaatgtatag
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