Clostridium sp. MF28: AXY43_02735
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Entry
AXY43_02735 CDS
T11014
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clom Clostridium sp. MF28
Pathway
clom03420
Nucleotide excision repair
clom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AXY43_02735
03430 Mismatch repair
AXY43_02735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clom03400
]
AXY43_02735
Enzymes [BR:
clom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AXY43_02735
DNA repair and recombination proteins [BR:
clom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AXY43_02735
MMR (mismatch excision repair)
Other MMR factors
AXY43_02735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
DEAD
SLFN-g3_helicase
ResIII
nSTAND3
NACHT
COG3_N
Motif
Other DBs
NCBI-ProteinID:
AVK47018
LinkDB
All DBs
Position
complement(682246..684513)
Genome browser
AA seq
755 aa
AA seq
DB search
MDTILNEERDVLLQKKDIIKQELKEKKQKFEEVGEKIKTLNKQVKSFSEEKQANERIFSY
LSQDIEKYEESLIEPYFGRVDFRENMGFTESIYIGKKGISNSKDGEEIVVDWRAPVADLY
YSGTGGDAYYKAPQGIVEGKLELKRKFLYKNSDIEKVFDEGINNIIINEEEGQNLVDEFL
KINLEESSGKKLKEVVATIQKEQNEIIRWPKNLPIIVQGSAGSGKTTIALHRLAYLIYRY
KESMSGDEILVLAPNKLFLSYISDILPSLGAEEVNQSTFEEMVLSKLKLKGKVYNKDEKL
LKIIEENDENLKKLIVNSSKVKGTMLFKTMLDRYIALMERDAIHIEDIKVGNEILFHKKE
IMRLYIKDLKAYPINKRKKEIKRYLNLKIKERIESLLIEIDNEWEKKIREIRRENEDSLE
RRKLLISRYEERDKIKENVKTNGKKEFNNYFKDWKDINSRDIYYNFYNDELFETATGSKI
PKVLADYMKEEFNSNFEKNIIDEDDLPALAYIRILLEGIDEEEKFKYIIVDEAQDYSPFQ
VYLVNSFAKGNALTLVGDLAQGIYYYKGLKTWEDITKQVFEGNATYIQLTQSYRSTVEII
DFAKKTLQSQNLGLKDAKPVLRHGEKPRIVKISSGYEYISAIEKIINEVQNHGKRTVAII
TKNMLQGEEIYKLLKGKSKYNFELILGKEKEIAEDLIIIPSYLTKGLEFDCTIILNPSED
NYKENILDERLLYVSLTRALHLEYIIIKDEATNLI
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggatacaattttgaatgaagaaagagacgtattactgcagaagaaagatataataaaa
caagaattaaaagaaaagaaacaaaaatttgaagaagtaggggaaaaaattaaaacttta
aataaacaagtaaagagctttagtgaagaaaagcaggctaatgaaagaatatttagttat
ttatctcaagatattgagaaatatgaagagtctttaatagagccttattttggtagagta
gactttagagaaaatatggggtttactgaaagtatatacattgggaaaaaaggtataagt
aatagcaaagatggagaagaaattgttgttgattggagagctccagttgcggatctttat
tatagcggaactggtggagatgcgtattacaaagcaccacaaggaatagttgaaggaaag
ctagaattaaaaagaaaatttttatataagaatagtgatatagaaaaagtatttgatgaa
ggaataaataacatcattataaatgaagaagaaggacaaaatttagttgatgagttttta
aagataaatcttgaagaaagcagtgggaaaaagctaaaagaagttgttgcaacaattcag
aaagaacaaaatgaaataataagatggcctaaaaatctgcctataatagtacaggggtca
gcaggttcgggtaagacaacaatagcgttacacaggttagcttatctcatttatagatat
aaagaaagcatgagtggagatgaaattttagttttagctcctaataaactatttctaagt
tacatttcagatattttacctagccttggagcggaagaagtaaatcaaagtacttttgag
gaaatggtattatcaaagttaaaactaaaaggaaaagtttataataaggatgaaaaatta
ttaaagataatagaagaaaatgatgaaaatctaaaaaagcttattgtaaattcaagcaaa
gttaaaggaaccatgctatttaaaacaatgcttgatagatatatagcattaatggaaaga
gatgcaattcatattgaagatattaaagttggaaatgagatattatttcataaaaaagaa
ataatgaggttatatataaaagatttaaaagcttatcctattaacaaaagaaaaaaggag
ataaaaagatatttaaatttgaaaataaaagaaagaatagaaagcctattaatagaaata
gataatgaatgggaaaagaaaataagagaaataagaagagaaaatgaagattcactggaa
agaagaaaattgcttataagtcgatatgaagagagagacaaaataaaggaaaatgtaaaa
actaacggtaaaaaggaatttaataattactttaaagattggaaggatataaattctaga
gatatctattataatttttataatgatgaattatttgaaacagcaactggaagtaagatt
cctaaggtattggcagattatatgaaggaagaatttaatagtaattttgagaagaatata
atcgatgaagatgacttgccagctcttgcatatataagaattttacttgaaggaattgat
gaggaagaaaaatttaaatatattatagtggatgaagctcaggattatagcccattccaa
gtatatttagttaatagttttgctaaaggtaatgcgttaaccttagtaggggatttagct
caaggtatttattattataaaggtctaaagacgtgggaagatataaccaaacaagtattt
gaaggaaatgcaacctacattcaattgacgcaaagctatagatcaacagttgaaataatt
gattttgcaaagaaaacattacaatctcaaaacttaggactaaaggatgctaaaccagtt
ttaagacatggtgaaaagcctagaatagtaaaaatttcgagtggatatgagtatatttca
gctatagagaaaatcattaatgaagtgcagaaccacggaaaaagaacagtagcaataatt
acaaaaaatatgttacaaggtgaagagatatacaaacttctaaaaggaaaaagcaaatat
aattttgaactaatattaggcaaggaaaaagaaatagcagaagatctaataataatccca
tcatatttaacaaaaggattggagtttgattgtacaataatattgaatccaagtgaagac
aactataaagaaaacattttagatgaaaggttattatatgtttctttaactagggcatta
catttagaatatataataataaaagatgaagctacaaatttaatttag
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