Clostridium sp. MF28: AXY43_03430
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Entry
AXY43_03430 CDS
T11014
Name
(GenBank) ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
clom Clostridium sp. MF28
Pathway
clom02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AXY43_03430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clom02000
]
AXY43_03430
01504 Antimicrobial resistance genes [BR:
clom01504
]
AXY43_03430
Transporters [BR:
clom02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
AXY43_03430
Antimicrobial resistance genes [BR:
clom01504
]
Gene variants
Macrolide resistance genes
Transporters
AXY43_03430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
KAP_NTPase
AAA_29
AAA_22
RsgA_GTPase
DUF4024
Motif
Other DBs
NCBI-ProteinID:
AVK47145
LinkDB
All DBs
Position
complement(825509..826987)
Genome browser
AA seq
492 aa
AA seq
DB search
MSLINVTNLTFSYDGNYDTIFENVSFQIDTDWKLGFTGRNGRGKTTFLNLLLGKYEYTGN
ISTNVNFEYFPYEVEEEENFTIDVIKEISPNSMDWEIMKELSMLDIDDNVLYRQFYTLSK
GEQTKALLAAMFLKENSFLLIDEPTNHLDAEARKKLSNYLRKKKGFILISHDRAFLDNCI
DHVLSINKTNIEIQKGDFSSWWENKKRQDGYELAENEKLRRDINRLSESAKRTSSWSSEV
EKSKKGTTNSGSKLDKGYVGHKAAKMMKRSKSIENRRETSIEEKSKLLKNIESSDSLKIS
QLAYHKNKLLELENISIFYGDTMVCKDINLSIEQGERISLKGKNGSGKSSIIKLICDENI
KYTGTFRKGSGLKISYVSQDTSYLKGNLTNYALENSIDESLFKAILRKLDFSREQFEKDI
SSFSGGQKKKVLIAKSLCEKAHLHIWDEPLNFIDVISRMQIEELLLEYSPTLLFVEHDSE
FCKNVATKFVEL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaataaatgttacaaaccttaccttctcttatgatggtaattacgatactatt
tttgaaaatgttagtttccagattgatactgattggaaattgggatttacgggaaggaat
ggaagaggaaagactacttttttgaatcttttacttggaaaatacgaatatactggaaat
atttcgaccaacgtaaattttgaatactttccgtatgaggtagaagaagaagaaaatttt
acaatagatgttataaaggaaattagtccaaattcaatggattgggaaataatgaaagaa
ttatcaatgctagatatagacgacaatgttctatatagacaattttacactctatcaaaa
ggagagcagaccaaggcattgttagcagctatgtttttgaaggaaaattcgtttttgctt
attgatgaacctacaaatcatttggatgctgaggctagaaaaaaacttagtaattattta
agaaaaaagaaaggatttattttgatttcacatgatagggcctttttagacaattgtatt
gatcatgttctctcaataaataagaccaatatagaaatacagaaaggtgatttctcaagt
tggtgggaaaataaaaagagacaggatggatatgagctagcagaaaacgaaaaacttagg
agagacattaatcgtttatcagaatctgctaagcgaactagtagttggtcaagtgaagtg
gaaaaatcaaaaaaaggaacaactaactctggctctaagcttgataaaggctatgttggt
cataaagctgctaaaatgatgaagcgttctaaatcaattgaaaatagacgggagacttca
attgaagaaaaatctaagcttttaaaaaatattgaaagttcggacagcttgaaaatctct
cagcttgcctatcataaaaataagcttttggaactcgaaaatatatcgatattttatgga
gatacaatggtttgtaaagatatcaatttaagcattgaacaaggtgaacgaatttcactt
aaaggtaaaaatggaagtggaaaatcaagtattatcaagcttatttgtgatgagaatata
aaatatacaggaacttttagaaaaggcagtggactaaaaatatcatatgtgtcacaggat
acctcttatcttaaggggaatttgactaactatgctcttgaaaacagcattgatgaaagt
ctttttaaagcaattttgagaaaactcgatttttcaagagagcaatttgagaaggatata
tcatcctttagtggtggacaaaagaaaaaagtactgattgcaaaaagtctttgtgaaaaa
gctcacttgcatatttgggatgaaccccttaatttcattgatgttatctctcgtatgcag
atagaagagttgttgcttgaatattcgccaacactacttttcgtagagcatgacagtgaa
ttttgcaaaaatgttgcaacaaagtttgtggagctttag
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