Clostridium sp. MF28: AXY43_08010
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Entry
AXY43_08010 CDS
T11014
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
clom Clostridium sp. MF28
Pathway
clom02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AXY43_08010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clom02000
]
AXY43_08010
Transporters [BR:
clom02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
AXY43_08010
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
tRNA_lig_kinase
AAA_22
AAA_23
TniB
AAA_29
nSTAND3
RNA_helicase
Mg_chelatase
NB-ARC
ATP-synt_ab
RsgA_GTPase
NACHT
AAA
Rad17
PRK
Motif
Other DBs
NCBI-ProteinID:
AVK47972
LinkDB
All DBs
Position
complement(1827047..1828036)
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AA seq
329 aa
AA seq
DB search
MDKQILCINNLSVSFGEGKDKVIAVDDVSFAFEKGRILGIIGESGCGKSTLALSIMGLLP
DKISNIENGEILFNGNDLSKFTEKQFEYIRGNEISMIFQEPMTSLNPVFKIGRQIAEPLK
IHKSLYGRALKEKVIEILRAVHIPNPEKVYNSYPHNLSGGMRQRVMIAMALSCEPEILIA
DEPTTALDVTIQAQILFLLKELNNKVKTSILFITHDLSVVAEVCDEVMVLYGGKVVEQCN
VYELFDNAKHPYTLGLLESQPHRCESGKPLKSIEGIVPSLSDMPSGCRFSNRCSKKFCIK
CESDIPPLFNIRDNHKVACWLYEEGKDFD
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggataaacaaattctctgtattaataatctatctgttagtttcggagaaggaaaagat
aaagtaatagctgtagatgatgtaagctttgcttttgaaaagggcagaatactaggaatt
ataggggaatctggttgtggtaagagtactttagctttatctatcatgggattgttacca
gataagataagtaatattgaaaatggagaaatattatttaatggaaatgatttaagtaag
tttacagaaaaacaatttgaatatattcgtggaaatgaaatttctatgatatttcaggaa
ccaatgacttcactaaatccagtatttaaaataggaaggcaaatagcagagccgctaaag
atacataaaagtttgtatgggagagcgcttaaggagaaggtaattgagattcttagagca
gtccatattccaaatccagaaaaagtttataattcttatccacacaacttgagtggaggg
atgcgtcagagagtaatgattgcaatggctctaagctgtgaaccagaaatattaatcgca
gatgaacctacaacagcgctagatgtaactattcaggctcaaattctatttctattaaaa
gaattaaataacaaagttaaaacatctattttgtttattacccatgatttatcggtagtt
gctgaagtctgtgatgaagttatggtattgtacggaggaaaggtggttgagcaatgtaat
gtatatgagttattcgacaatgctaagcatccttatactcttggattattggagtcgcaa
ccgcatagatgtgaaagtggaaaacctctaaaaagtattgaagggatagtgccgtcttta
tcagatatgccctcagggtgccgatttagtaatagatgttctaaaaagttttgcataaaa
tgcgaaagcgatattccaccattatttaatattagagataatcataaagtagcatgttgg
ttatatgaggagggaaaggattttgattga
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