Clostridium sp. MF28: AXY43_08540
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Entry
AXY43_08540 CDS
T11014
Name
(GenBank) LacI family transcriptional regulator
KO
K10439
ribose transport system substrate-binding protein
Organism
clom Clostridium sp. MF28
Pathway
clom02010
ABC transporters
clom02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AXY43_08540
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
AXY43_08540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clom02000
]
AXY43_08540
Transporters [BR:
clom02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
AXY43_08540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AVK48070
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Position
complement(1947247..1948710)
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AA seq
487 aa
AA seq
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MEILNFRLRKLSCIVLIILVGSILSACSQVGKVIVDNEPKEDRQKDYIEEVPTQTVTNEK
SVDLAPLYDQVRNLKGQEALDFFESLKSKGLSDSDILEFFINLPLSDANKEITDIYKNEK
FETYMSTYPTGKPFGNYKWTNGDGTKIKGAFSELDLKLPFSNYVALKSGPVGDLNKKYRI
GVAIHGFDQPWNVSLADAAQWEAERHPNVEVDVKDAQWDNDKMADIIDSFVLQKVDGILT
WPMVESETTIAPVKRAIEAGIPVVSVDRMTGLEETTSRVTGNFPANGAQCGMYLIWKLAK
EGSLNANVVLLRKPSGSTADANRTGHFLKVLSYFPDIHILKSYHDDDNTAEALANMQLAL
NEYPSIDVVFGTGDHEAIAAYDASKNANRLNSRKDTKKMMFLSIDDSKKAITSVKDGLFE
VNTPYTPLISDIGMRTLLNIITKNGSMPHDIITPNIPMVTKDGDTIFGLKTQTPDQWYEY
TFGAPIK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaaatattaaattttaggttacgcaaattaagttgcattgtattaataattttggtt
ggaagtattttatcagcttgttcccaagtaggtaaagtaattgttgataacgaaccaaaa
gaagacaggcaaaaagattatattgaagaagttccaacacaaactgtaacaaatgagaaa
tcagtggatttggcaccgttgtacgatcaggtaagaaatttaaaaggacaagaggcattg
gatttttttgaaagtcttaaatcaaaagggttatcggatagtgatatattagaatttttt
attaatttacctctttcagatgcaaataaagagattacggatatatataagaatgaaaaa
tttgaaacttatatgagtacatatcctacgggaaagcctttcggtaactataaatggaca
aatggagatggaactaagataaaaggagcatttagcgagctggatttgaaattaccattt
tcaaattatgtggccttaaaatcaggaccagttggagacttaaataaaaagtatagaatt
ggtgttgctattcatggatttgatcagccatggaatgttagtttagctgatgcagctcaa
tgggaagcagaaagacatccaaacgtcgaagttgatgttaaagatgctcaatgggacaac
gataaaatggcggatattatagatagttttgttttgcagaaagtggatgggattttaact
tggcctatggttgaatcagaaacaactattgcaccagtaaaaagggctattgaggcaggt
ataccagttgtaagcgttgatagaatgacaggactcgaggaaaccacgagtagagttacc
gggaattttccagcaaatggcgctcagtgtggtatgtatttaatttggaaacttgcaaaa
gaaggcagtctaaatgcaaatgtagttcttcttagaaagccttctggaagtactgcagat
gctaatagaactggtcattttcttaaggtactaagttatttccctgatattcatatatta
aaatcatatcatgatgatgataatacagcagaagcacttgccaatatgcaattagcatta
aatgaatatccttctattgatgttgtatttggaacaggtgatcatgaagcaattgctgct
tatgatgcatcaaaaaatgctaatagattaaatagcagaaaggatactaaaaagatgatg
tttttatcaattgatgattctaaaaaagcaattacatccgtaaaagatggattgtttgaa
gtgaatacaccatacacgcctttaatatctgatattggaatgagaactttacttaatata
atcactaaaaatggttcaatgccacatgatattattacacctaatatacctatggtgaca
aaagacggagatactatatttggattgaaaactcaaacacctgatcaatggtatgaatat
acttttggggcaccaattaaataa
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