KEGG   Clostridium sp. MF28: AXY43_09840
Entry
AXY43_09840       CDS       T11014                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
clom  Clostridium sp. MF28
Brite
KEGG Orthology (KO) [BR:clom00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:clom03032]
    AXY43_09840 (gyrB)
   03036 Chromosome and associated proteins [BR:clom03036]
    AXY43_09840 (gyrB)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:clom02048]
    AXY43_09840 (gyrB)
Enzymes [BR:clom01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AXY43_09840 (gyrB)
DNA replication proteins [BR:clom03032]
 Prokaryotic type
  DNA Topoisomerases
   AXY43_09840 (gyrB)
Chromosome and associated proteins [BR:clom03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    AXY43_09840 (gyrB)
Prokaryotic defense system [BR:clom02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    AXY43_09840 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3 DUF7035 DUF6187
Other DBs
NCBI-ProteinID: AVK48308
LinkDB
Position
complement(2275578..2277527)
AA seq 649 aa
MELKNTNAYDVTDLTSLEKLEPVRIRPGMYIGSTGSKGLHHCIWEIIDNSIDEIANGYGN
KVTITLNEDKSVTVLDNGRGIPTGIHPIKKKSGVEMVFTELHTGGKFDNKNYKTSGGLHG
VGAAVVNALSEWLEVEVYQNGNIYRQRFEYAFDKELKREMPGTSVGSLKVIGKTDKVGTK
ITFKPDKEIFSTTDFKFDIIDSRLQELAFQNKGIRLELIDKRKGQEITKEYYSENGLLDF
INYLNESKTPIHEEPIIFDGERTVGELQLYGEVCIQFTDSTTEYIASYVNNIPTTEAGTH
ETGFKTGMTRSFKEWSKKLGLVKEKDKEFEGDDLREGMTAIVRIKITNPIFEGQTKTKLG
NNEAYTMMNDLVYTKFSEWIEDNKTLATSIINNALEAAKRRDKIKKINEAEKKKIGKGTA
PLAGKVAVCTLKDKTVNEFIVVEGDSAGGSAKQARDRRFQTIMPSKGKIMNTEKQKLENV
LASEELKIFNTAVGTGTLDNYREEDLKYDKIIIMSDADVDGYHIRTLWMTYIYRYMRPLI
ANGHLYLAQPPLYKVYRETKGKTIVKYAYSDDELENTKKQVGKGALIQRYKGLGEMNPDQ
LWDTTLNPESRTLLQVTIEDAAKAEKMVSLLMGDIVEPRKNYMYKYGEF
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggaattaaaaaatactaatgcttatgatgtaacagatttaacatcacttgaaaagcta
gaacctgtaagaataagaccgggtatgtatataggatctacaggtagtaaggggttacat
cactgtatatgggaaataatagataactccatagatgaaatagctaacggatatggtaac
aaagtaaccataacgttaaatgaagataaaagtgtaaccgtattggataacggaagaggt
atccctacaggaattcatccaatcaaaaagaaatctggagttgaaatggtatttactgaa
cttcatacaggaggaaagtttgataataaaaattataaaacatctggaggacttcatgga
gttggagcagcagtagtaaatgctttatcagaatggttagaggttgaagtttaccaaaac
gggaatatatacagacaaagatttgaatatgcttttgataaagaattaaaaagagaaatg
ccaggaacatctgttggcagcttgaaggtgattggaaaaacagataaagttggaacaaag
atcacatttaagccggataaagaaatcttctcaactactgattttaaatttgatataata
gatagccgattacaggaattggcattccaaaataaagggataagattagaattaatagat
aaaagaaaaggacaagaaatcactaaagaatattactcagaaaatggtcttttagatttc
ataaattatctaaatgaaagtaaaacaccaattcatgaagagcccataatttttgacggt
gaaagaactgttggggaacttcaattatatggtgaagtatgtattcaatttacagattca
actactgaatatattgcaagttatgtaaataacattccaacaacagaagcagggactcat
gaaactggatttaagactggaatgacaagatcttttaaagaatggtctaaaaagttagga
ttggttaaggaaaaagataaggaatttgaaggcgatgatttaagagaaggtatgactgct
attgtaagaattaaaatcacgaatcctatctttgaaggtcaaactaagactaaacttgga
aataatgaagcatatactatgatgaatgatttagtgtatactaaattttctgaatggata
gaagataataaaactttggcaacaagtataattaataacgcattagaagcagctaaaaga
agagacaagattaagaaaataaatgaagcagaaaaaaagaaaataggaaaaggtacagca
ccgcttgcaggaaaagttgctgtgtgtacattgaaagataaaactgtgaatgaatttata
gttgtggaaggagattcggcaggaggatctgcaaagcaagccagagatagaagatttcaa
actatcatgccttcaaagggtaagataatgaatactgaaaaacaaaaacttgaaaatgta
ttggcttctgaagaattaaaaatatttaacactgctgttggaacaggtactttggataat
tatagagaagaagatttaaaatatgacaagataataataatgagtgatgctgatgtggat
ggatatcatattaggacattatggatgacttatatttatagatatatgagaccgcttatt
gctaatggacatttatatttagcgcagcccccattgtataaagtgtatagggaaactaaa
gggaaaactatagttaagtatgcgtatagtgatgacgaacttgaaaatacaaagaaacaa
gttggaaaaggtgcactgattcaaagatataaaggactaggagaaatgaatcccgatcaa
ttatgggatacaacactaaatccagaaagtagaactctgcttcaagtaactatagaagat
gcggcaaaagcagaaaagatggtttcgttacttatgggagatattgttgaacctagaaag
aactatatgtataaatacggagaattttaa

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