Clostridium sp. MF28: AXY43_12375
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Entry
AXY43_12375 CDS
T11014
Name
(GenBank) penicillin-binding protein
KO
K05364
penicillin-binding protein A
Organism
clom Clostridium sp. MF28
Pathway
clom00550
Peptidoglycan biosynthesis
clom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXY43_12375
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clom01011
]
AXY43_12375
Peptidoglycan biosynthesis and degradation proteins [BR:
clom01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AXY43_12375
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
PBP_dimer
YdfZ
Motif
Other DBs
NCBI-ProteinID:
AVK48781
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Position
complement(2965812..2967281)
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AA seq
489 aa
AA seq
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MKNVSNSIKQVMVVFLFCFVALISYIAYFQVFSAPTIAESEGNQRLWARRNEVLRGTIYD
RNKNPLTTSARVDALTQKRTYVNGDLYVHALGYVDPRYGLTGLEANYDSELTTYNKLTNN
ILNLTKDFSIDKLKSMFKNRKEDEVKVGNGVITTLDPTLQKIAYDALGSNKGAVVALNPK
TGEVLAMVSKPTYNPNDLEGSMKASNEDSPFINRAVSGKYPPGSTFKTVTLSSALENMPG
VTNRTFNDTGKIVFNDKQSLSNDNGEVNGEIDLKDAYRLSSNFVFGTLAMELGNDKLKAT
AEKFGFNNTVESDGFKIDQSQFPKLSKAEIGSIAQSGIGQSSILATPMEMALVASTVADD
GKMMEPRLVSQVVDKDGNVVKTVEPKVNKQVISSANAAIIKDYMKNLVDSRIDSTWSYFQ
GTDAAGKTGTADYNLANGESAKPHSWFIGLAPASNPKIAVAVIVENGGYGASAAAPIAGK
LIRQAVIGN
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaatgtttctaatagtataaaacaggtaatggtagtttttttattttgctttgta
gctcttatctcgtatattgcatattttcaagttttttcggctcctactatagctgaaagt
gaaggtaatcaaaggctttgggcaagaagaaatgaagttttgaggggaaccatatatgat
agaaataaaaatccgcttacaacaagtgcaagggtagatgcgctaacacaaaaaagaact
tatgttaacggagatttatatgttcacgcactaggatatgtagatccaagatatggattg
acaggattagaggcaaattatgatagtgagttaaccacatacaacaagcttactaacaat
attttaaatctaactaaagattttagcatagataagttaaaatcaatgtttaagaataga
aaagaagatgaggtcaaagttgggaatggtgttataactacattagatccaacacttcaa
aaaatagcatatgatgcacttggaagtaataagggtgcagtggtagccttaaatccaaaa
acaggagaagtattagctatggtttctaagccaacgtacaatccaaatgatttggaaggc
tcaatgaaagcttctaatgaagatagtccgtttataaatagagcagtatcaggaaaatac
ccgccaggatcaacatttaaaacagtaactcttagcagcgcattagaaaatatgcctggg
gttacaaatagaacttttaatgatacaggtaaaatagtatttaacgataaacagtcattg
agcaatgataatggagaagttaatggtgaaatagatttaaaggatgcctatagattatca
agtaattttgtatttggtacattggcaatggagctaggaaatgataagttaaaagctact
gcggagaagtttggttttaataatacagtagaatctgatggatttaaaatagatcagagt
caatttccaaagttatctaaagcggaaattggtagcatagctcaatctggaattggccaa
agtagtattttagctacgcctatggagatggctttggttgcaagtacagtggctgatgat
ggtaagatgatggagccaagactcgttagccaagtggtggataaggatggtaatgtagtt
aagacagtggaaccaaaggtgaataaacaagttataagttcagctaatgctgcaattata
aaagactatatgaaaaatttagttgattcaagaatcgactctacttggagttattttcaa
ggaactgatgcagcaggtaagactggtacagctgattataatcttgctaatggagaaagc
gctaaacctcattcatggtttattgggcttgcaccagcgagcaatcctaagattgcagtt
gctgtaatagttgaaaatggaggatacggagcgagtgcggcagcaccgatagcaggaaaa
ttaattaggcaagcggttattggaaattaa
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