Clostridium sp. MF28: AXY43_14785
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Entry
AXY43_14785 CDS
T11014
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
clom Clostridium sp. MF28
Pathway
clom00470
D-Amino acid metabolism
clom00550
Peptidoglycan biosynthesis
clom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AXY43_14785 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXY43_14785 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clom01011
]
AXY43_14785 (murD)
Enzymes [BR:
clom01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AXY43_14785 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
clom01011
]
Precursor biosynthesis
Amino acid ligase
AXY43_14785 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
PipB2_N
CbiA
APS_kinase
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AVK49161
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Position
3481356..3482732
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AA seq
458 aa
AA seq
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MKKDFNEFKEFIVGKKVGVVGIGVSNIPLINFLIDLGAAVTAFDKKSLEELGDVAEGFNK
RGVKLELGEKYLDNLKGFDVIFKTPSMRIDSEALVRVRKEGAYVTSEMEEFVRYTRGKVY
GITGSDGKTTTTTIISKLLEGQGYKTWVGGNIGTPLFSEIENIHDEDKVVLELSSFQLMT
MTQEIDVAVCTNLSPNHLDMHKSMKEYIDAKKNIFIYQNSNGLLVVNRENEITHGFIKEA
KGNVKEFSSKRELIDGAYYKNGILYLEDKEVCKKDDIVIKGMHNVENYLAAFLATKDDVS
VEVMKKVAETFAGVEHRCELVREIDRVKYYNDSIASSPTRTLAGLRAFDEKVIVIAGGYD
KNIPFEPLAYEGYPYIKELILMGATKHKIKDVFDNLENEKGIKININMVESLEEAVRLAE
SIANPGDIVTLSPACASFDMYPNFMIRGNKFKEIVKSL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagattttaatgagtttaaggaatttatagtgggtaagaaagttggagttgtt
ggaattggagtaagcaatattccgttaatcaattttttaatagatttaggtgctgctgta
acggcttttgataaaaagagtttagaagaacttggagacgttgcagaaggatttaataaa
aggggagttaagctggagcttggagaaaaatatctagataacttaaaagggtttgatgtg
atatttaaaacaccatcaatgaggattgatagtgaagcattagtaagggttagaaaagaa
ggagcatatgttacttctgagatggaagagtttgttaggtatacaagaggaaaagtctat
ggaataaccggtagcgatggaaagacaacaacaacaacaattatttctaagttactagaa
ggtcaagggtataaaacatgggtcggaggaaatataggaactccattattttcagaaata
gaaaacatacatgatgaagataaagttgtattagagttatctagctttcaacttatgaca
atgactcaagaaatagatgttgcagtatgtacaaatttatccccaaatcacttagacatg
cataaaagtatgaaagagtatatagatgcgaaaaagaatatctttatatatcaaaattca
aatggacttttagtagtgaatagagaaaacgaaattacccatggatttataaaagaagcg
aaaggaaatgtgaaagagttcagttcaaaaagagaactgatagatggggcatactataaa
aatgggatactctatcttgaagacaaggaagtttgcaaaaaagacgatatcgtaattaag
gggatgcataatgttgaaaattatcttgcagcatttttagcaacaaaagacgatgtctct
gtggaggtaatgaaaaaagttgctgaaacatttgctggcgttgaacataggtgtgaactt
gtaagagagatagacagagttaaatattataatgattctattgcttcaagtcctacaaga
actttagcggggcttagagcatttgatgaaaaagtaatagttattgcaggagggtatgat
aagaatataccttttgaacctttagcatatgaggggtacccatatataaaagaattgatc
cttatgggagcgacaaagcacaagatcaaagatgtttttgataatttagaaaatgaaaaa
ggaattaaaattaatataaatatggttgagtctttggaagaggcagtaagacttgctgaa
agcatagcgaatccaggcgatattgtcactctatcacctgcttgtgcatcatttgatatg
tatcctaattttatgataagaggtaataagtttaaagagatagtgaagtctttataa
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