Clostridium sp. MF28: AXY43_19760
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Entry
AXY43_19760 CDS
T11014
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
clom Clostridium sp. MF28
Pathway
clom03030
DNA replication
clom03430
Mismatch repair
clom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AXY43_19760
03430 Mismatch repair
AXY43_19760
03440 Homologous recombination
AXY43_19760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clom03032
]
AXY43_19760
03400 DNA repair and recombination proteins [BR:
clom03400
]
AXY43_19760
Enzymes [BR:
clom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AXY43_19760
DNA replication proteins [BR:
clom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AXY43_19760
DNA repair and recombination proteins [BR:
clom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AXY43_19760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
DUF7669
Motif
Other DBs
NCBI-ProteinID:
AVK50040
LinkDB
All DBs
Position
complement(4573235..4573864)
Genome browser
AA seq
209 aa
AA seq
DB search
MKLLFFDTETTSIKPGSICQLSYITVDASKKPQITTGKNFFFTVDEMDPSAQEIHGFSLE
KLYELSNGQYFEDLVPEFLNDFMTADFLIGHNVNFDVRFLKHELLSLGEDFYPKNVFCTM
AYYRDICKIPKANGEIKNPKLSEVIDWLNISSEQIVETSEKLFEGSGNYHDARFDTAATY
LTVIEGLKKGYFPKGYFSNLLAKNSNGLK
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaaattattattttttgatacagaaaccactagtataaaaccaggcagcatatgtcag
ttaagttacataactgttgatgctagtaaaaaacctcagataacgactggtaaaaatttc
ttttttacagtcgacgagatggacccttctgcccaagaaattcatggtttttctttagag
aagctttatgaattatctaatggacaatattttgaggatttagtacctgaatttcttaat
gattttatgactgctgattttctaatcggtcataatgttaattttgatgttagattttta
aaacatgaactattatctttaggagaggatttttacccaaaaaatgttttctgcactatg
gcttactatagagatatatgtaagattccaaaagccaatggagaaatcaaaaatccaaaa
ttatctgaagtgatagattggttaaatatttcaagcgagcaaattgttgaaacatctgaa
aaattatttgaaggtagtggaaattatcatgatgccagatttgatacagctgcaacatat
ttaactgttatcgaaggattaaagaaaggctactttccaaaagggtatttttcaaatctt
ctagctaagaactcaaacggcttaaaataa
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