Clostridium sp. MF28: AXY43_20925
Help
Entry
AXY43_20925 CDS
T11014
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clom Clostridium sp. MF28
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clom03016
]
AXY43_20925 (truB)
Enzymes [BR:
clom01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AXY43_20925 (truB)
Transfer RNA biogenesis [BR:
clom03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AXY43_20925 (truB)
Prokaryotic type
AXY43_20925 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AVK51483
LinkDB
All DBs
Position
4825456..4826331
Genome browser
AA seq
291 aa
AA seq
DB search
MNGVLNIFKNKGMTSFDVVRKIKFLANEKKVGHTGTLDPEATGVLPVCLGKATKTIDYIM
NSNKVYEVKFLLGVKTTTYDLEGEILEKNEIDHIKSDEVSEVALSFIGEYDQVPPMYSAL
KKNGVRLYELARKGIEVEREARKVRIFNISDLKIELPYVYMKVACSKGTYIRSLCYDIGE
KLKVGAAMAELNRSETSIFKQLDSVNIDDLTKENIQDYIMTIEDALSFYPKITVKSTFTK
LLINGVKVFDKRLTNEKREKNVLYRVYDSEGIFIGIGKQDDDGFKIEKLLL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
ataaatggagtattaaatatattcaaaaataaaggaatgacttcctttgatgtagttaga
aaaataaaattcttggctaacgaaaagaaagtcggtcatactggaacattggacccagaa
gctactggagtccttccagtctgccttggaaaagctacaaaaactattgattatatcatg
aacagtaataaggtatatgaggtgaaatttctacttggagtgaagacaaccacatatgac
cttgaaggtgagatattggagaagaatgaaatagatcatattaagagtgatgaagtttca
gaggtcgcattatcctttatcggagaatatgaccaagttccacctatgtattctgccctt
aaaaaaaatggagtaaggctctatgaattagctaggaaaggtattgaggttgaaagagaa
gcgagaaaagttagaatatttaatatatcagatttgaagattgaattaccttatgtatat
atgaaagtagcttgttcaaaagggacatatattagaagtttatgttatgatattggtgaa
aaactaaaagttggagcagctatggcagaattaaatagatctgaaacatctatttttaag
caattagatagtgtaaacatagatgatttaactaaggaaaatatacaagattatattatg
actatagaggatgcactttctttttaccctaaaattacagtaaagagtacatttactaaa
ttattaataaatggagttaaagtattcgataagagattgacaaatgaaaaaagagaaaaa
aatgttctatatagggtatatgatagtgaaggcatttttataggaattggaaaacaagat
gatgatggattcaaaatcgaaaaattgttgctttag
DBGET
integrated database retrieval system
