Clostridium sp. MF28: AXY43_20970
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Entry
AXY43_20970 CDS
T11014
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clom Clostridium sp. MF28
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clom03009
]
AXY43_20970
Enzymes [BR:
clom01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
AXY43_20970
Ribosome biogenesis [BR:
clom03009
]
Prokaryotic type
ribosomal protein modification factors
AXY43_20970
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
DUF5600
Motif
Other DBs
NCBI-ProteinID:
AVK50271
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Position
4836512..4837909
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AA seq
465 aa
AA seq
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MSEIKIEIAKNREQYNEEASSKYKVGMVSLGCDKNRVDSEIILGKMSDEYEITNNPKNAD
IIIVNTCGFIESAKQESIDTILEMANYKINYKCKLLIATGCLTQRYGEELKTLIPEIDIM
LGVNDYNKINEIITEFIDGNKLATELLNYSDENINEGKRIITTQRESAYIRIAEGCNNFC
TYCIIPKIRGKFRSRKMENIINEARDLSESGVKEIILIAQDTTLYGSDIYGKKNLHVLLK
ELSKIEGIEWIRVLYCYPEEIYDELINEIACNEKVVKYLDIPIQHISDKILKLMGRKTSK
KDIINKIQILRERVPEIVIRTTFIVGFPNETDEDFNEIIDFLKEHKLEKVGAFTYSQEED
TPAAKMDGQIDEEIKEKREEDLMLLQKNISEEINKLKIGKLYDILVEGYNGKCYYGRSYE
MAPDIDANVLFESNAKIENGEFVKVKIVETMDYDLVGVVVDESCK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaaattaaaatagaaatagcgaagaatagagaacaatataatgaagaggcttca
agcaagtataaagttggaatggtaagcttaggctgtgataaaaatagagttgactcagag
ataatattaggtaagatgagtgatgaatatgagataactaataaccccaagaacgcagat
ataattatagtgaatacatgcggatttatagagagtgccaaacaagaatccattgacaca
attttagagatggctaattataaaattaattataaatgcaaactgcttatagctacaggg
tgtcttactcaaagatatggagaagagttgaagacattaatacctgaaatagatataatg
cttggagttaatgactataataaaataaatgaaatcataactgaatttatagatggaaat
aaattagcaacagaacttttgaattattccgatgaaaacattaatgaaggaaagagaatt
attacaactcaaagggagagtgcatatataagaatagcagaaggatgcaataatttttgc
acatattgtataattcctaagataaggggaaaatttagaagtaggaagatggaaaatatt
ataaatgaagcaagagatttgagtgagagtggagtaaaggaaattatacttatagctcaa
gacactactttatatggaagcgatatttatgggaaaaagaatctgcatgttcttcttaag
gaattatccaaaattgaaggaattgaatggataagggtgctttattgttatccagaagag
atatatgatgaacttataaacgaaattgcttgcaatgaaaaagttgtaaagtatttagat
atacctattcaacatataagcgataagattttaaaacttatgggaagaaaaactagtaaa
aaagatataattaataaaatacaaattttaagagaaagagttcctgaaattgttataaga
acaacatttatagtaggatttccaaacgaaactgatgaagattttaatgaaattattgat
ttcttaaaggaacataagcttgagaaagtaggtgcatttacttattctcaggaagaagat
actccagctgctaaaatggatgggcaaatagatgaagaaattaaggaaaaaagagaagaa
gatttaatgcttttacaaaagaatatttcagaagaaataaataaattgaaaattggaaag
ttatatgatattcttgttgagggatataatggaaagtgctattatggaagaagctatgaa
atggctcctgatatagatgcaaatgtattatttgaatcaaatgcaaaaatagaaaatggt
gaatttgtaaaggtaaaaatagtagagactatggattatgatttagtgggagttgttgtt
gatgaatcttgcaaataa
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