Clostridium sp. MF28: AXY43_22685
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Entry
AXY43_22685 CDS
T11014
Name
(GenBank) stage V sporulation protein D
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
clom Clostridium sp. MF28
Pathway
clom00550
Peptidoglycan biosynthesis
clom01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AXY43_22685
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
clom01011
]
AXY43_22685
Peptidoglycan biosynthesis and degradation proteins [BR:
clom01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AXY43_22685
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
YonK
DUF5491
Motif
Other DBs
NCBI-ProteinID:
AVK50591
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Position
5224245..5226509
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AA seq
754 aa
AA seq
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MEEQVLKKKKHVSKVKIRKRTRSVAFSLTAIFAILIIRLSYIMMVDGKDYSARAEEQWTS
EVKIDAKRGEVLDRNGNELAVSANVYRVDFDLNSIRNYLKRSVKSIPNKELTNMKSVGIP
IPTEGSGLTNDDIAPVIAKVLNMDVSEIKADLEKKLPSGADAFSVTVARKIEKDIADKVK
ELNINGIIVSQDTKRYYPNNNFLSHVLGTTDPDGKGLSGVELQYNSYLSGIPGMKVAELD
KNNEDLPYTVSQYTEPVNGKDVTLTIDENIQNIVENIAQKAYKDDKAKEVSILVMNPKTG
EVLGMVNKPDFDPNNPYDGASKFDGADLTDKIQKMWRNRLVSDTFEPGSIFKVITTISGL
ENNVANKDTQFVDNGSISVGGIVVKDAERENKLQNLLQIIQNSSNVCFVKLGQMIGKDKL
YESINKFGFGKVSGIDLPGEASGIVKPIDKVSEADLATISFGQTNTVNSVQYMAAFNAIA
NGGTLIQPHVMKEITHNDENSVKIVDETFKPTTATVASAEKTAELRSYLEGVVTGGTATG
TFIEGYHIGGKTGTAEKVVGGKYGEGKYISSFVGMAPANDPKVTVMITVDEPSNGEYYAS
QVAVPYAKMLFTGIFNYLDSASSNEKIVKDIIIPEVRNMKVSDAEKVLKDKGLDFNIDGN
EETILSMKPYPGSSVKEGSKITLYTSGDATYNNNVVMPNVRGYLKEDATTLLKNLGITAT
FEGNGVVSVQNISEGEVIPKGTTAELILSSYYED
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacaggtattgaaaaagaaaaaacatgtaagtaaagtaaaaatacgaaagaga
acgagaagtgtcgctttttcattaacagctatttttgctatattaataattagactctct
tatataatgatggttgatggaaaagactattctgcaagagctgaagaacagtggacaagt
gaagtgaaaatagatgctaaaagaggagaagttctggatagaaatggaaatgagctagct
gtatctgctaatgtctatagagtggattttgatttaaattcaataaggaattacttgaaa
agatctgtaaaatccattccaaataaagagcttaccaatatgaaaagtgtaggaattccg
atccctacagaaggaagtggcttaacaaacgatgatattgcacccgtaattgcgaaagta
ttgaatatggatgtgtcagaaataaaagcggatttagaaaagaagcttccaagtggggca
gatgcattttctgtgactgtagcacgaaaaatagaaaaagatatagcggataaagtaaaa
gaacttaatataaatggaattatagtttcgcaagatactaaaagatattatcctaataat
aattttctatcgcatgttttaggaactactgatcctgatggcaaaggattaagtggtgta
gaacttcaatataattcatatttgtcaggaattcctggaatgaaggttgcggagcttgat
aaaaataatgaagatttgccttatacagtttctcaatatacggaacctgtaaatggaaaa
gatgttactttaactatcgatgaaaatatccaaaacattgttgaaaatatagcacaaaaa
gcctataaagatgataaagctaaagaagtttcgatattagtaatgaatcctaagactggg
gaagttctaggaatggtaaataaaccagattttgatcctaataatccatatgatggagca
agtaaatttgatggagcagacctcactgataagatacagaaaatgtggagaaatagattg
gtaagtgatacgtttgaaccaggatcaatatttaaagtaatcactactatatctggtcta
gaaaacaatgttgcaaataaagatacacaatttgtggataatggatcaatatctgtaggt
ggaattgtagtgaaggatgcggaacgagaaaataaacttcaaaatttacttcaaatcatt
cagaattcatcaaatgtgtgttttgtaaaattaggacaaatgattggtaaagacaaattg
tatgaatctattaataagttcggattcggaaaagtaagtggaattgacttaccaggggag
gcatctggaattgtgaaaccaatcgataaagtttcagaagcggatcttgcaacaatatca
tttggacagactaatacagtaaattctgttcaatatatggctgcatttaatgctattgct
aatggaggtactctaattcaacctcacgtaatgaaagaaattactcataatgatgaaaat
agtgttaagattgttgatgaaacttttaaacctacgactgctacagtcgcaagtgcagaa
aaaacagcagaacttagaagttatcttgaaggtgttgtaactggaggaacagcaactgga
acttttatagagggatatcacattgggggtaaaacaggaactgcagaaaaggttgttggt
ggtaagtatggagaaggcaaatatatatcttcatttgtgggaatggctccagctaatgat
cctaaagttacagttatgataactgttgatgagcctagtaacggtgaatactatgcttca
caagtagcagtaccatatgcaaaaatgctgtttacaggtatctttaactatttagatagt
gcatcttctaatgagaaaattgttaaggatattattatcccagaagttagaaacatgaaa
gtttcagatgctgagaaagtattaaaggataaaggcctagattttaatatagatggaaat
gaagaaacaatattaagtatgaagccatatccaggttcatcagtaaaggaaggttctaaa
ataactctttacacaagtggggatgcgacttataataataatgttgtaatgccaaatgtt
aggggatatttaaaagaggatgcgactactttattaaaaaatcttggaataacagcaact
tttgaaggaaatggagttgtttcagtacagaatatttcagaaggtgaagttatacctaaa
ggaacaactgccgagttgattttaagttcgtattatgaagattaa
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