Clostridium sp. MF28: AXY43_22930
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Entry
AXY43_22930 CDS
T11014
Name
(GenBank) farnesyl-diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
clom Clostridium sp. MF28
Pathway
clom00900
Terpenoid backbone biosynthesis
clom01100
Metabolic pathways
clom01110
Biosynthesis of secondary metabolites
Module
clom_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
AXY43_22930
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
clom01006
]
AXY43_22930
Enzymes [BR:
clom01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
AXY43_22930
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
AXY43_22930
2.5.1.29 geranylgeranyl diphosphate synthase
AXY43_22930
Prenyltransferases [BR:
clom01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
AXY43_22930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Plasmid_stab_B
Motif
Other DBs
NCBI-ProteinID:
AVK50638
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All DBs
Position
5264862..5265731
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AA seq
289 aa
AA seq
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MEINNLKKDINEYLENYFSEKGSFNRIIYDSCSYSLNIGGKRIRPILLSLTYYIYKEDYR
KVIPMAAAMEMIHTYSLIHDDLPCMDNDDLRRGKPTNHIKFQENIAVLAGDALLNEAMII
MMDYAIKSENNALRAAHEIAVAAGAEGMIGGQVVDIISEGKKISKDELEYMHAKKTGALI
RAAIVSGAILAEAPEDDLRLLREYGEKLGLVFQIKDDILDVIGDSNILGKNIHADEEHNK
TNFISVFGLDKCKELCETLTKECISILNSLSVNSDCLVELTYTLLNREN
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggagataaataatttaaaaaaagatattaatgaatatttggaaaattacttcagtgaa
aaaggaagttttaatagaattatatatgattcatgtagctatagtttgaatataggtgga
aaaagaatacgaccaatattgctttcgctaacttattatatatacaaagaagattatagg
aaagttataccaatggccgctgctatggaaatgattcatacatattcattaattcacgat
gaccttccttgtatggataatgacgatttaagaagaggaaaaccaacaaatcatattaaa
tttcaggaaaatatagcagttcttgcaggagatgctttattaaatgaagctatgataata
atgatggattatgcgataaaaagtgaaaacaatgctttaagagcagcacatgagatagca
gttgcggcaggcgcagaaggtatgataggcggtcaagtagtagatattatttcagaagga
aagaagatatcaaaagatgagctagaatatatgcatgctaaaaaaacaggtgcacttatt
agagcggcaatagtttcaggagcaattttagctgaagcgcctgaagatgatttgagatta
ttaagggaatatggtgaaaagctagggcttgtttttcaaataaaagatgatatattagat
gttattggagatagtaatatattaggtaaaaatatacatgcagatgaagaacataataaa
acaaattttatatcggtctttggattagataagtgcaaagaattatgcgaaactttaact
aaagaatgcatatctattcttaacagtttgagtgttaattcagattgcttagttgaactt
acatatactcttttaaatagagaaaattaa
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