Clostridium sp. MF28: AXY43_23980
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Entry
AXY43_23980 CDS
T11014
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
clom Clostridium sp. MF28
Pathway
clom00260
Glycine, serine and threonine metabolism
clom00460
Cyanoamino acid metabolism
clom00630
Glyoxylate and dicarboxylate metabolism
clom00670
One carbon pool by folate
clom00680
Methane metabolism
clom01100
Metabolic pathways
clom01110
Biosynthesis of secondary metabolites
clom01120
Microbial metabolism in diverse environments
clom01200
Carbon metabolism
clom01230
Biosynthesis of amino acids
clom01240
Biosynthesis of cofactors
clom04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AXY43_23980
09102 Energy metabolism
00680 Methane metabolism
AXY43_23980
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AXY43_23980
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AXY43_23980
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AXY43_23980
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AXY43_23980
Enzymes [BR:
clom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AXY43_23980
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AVK50834
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Position
5496521..5497756
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AA seq
411 aa
AA seq
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MNFENIQREDKEIYDLIEKELVRQQKGIELIASENIVSPAVMEAMGSYLTNKYAEGYPNK
RYYGGCHVVDEIEQIAIDRAKELFGAEHANVQPHSGSQANMAVYFAVLEPGDTVLGMDLS
HGGHLTHGSPVNFSGKLFNFVSYGVDKETEMIDYENVRKLAIENKPKLIVAGASAYARIL
DFPKFREIADEVGALLMVDMAHIAGLVAAGVHPSPVPYSDFVTTTTHKTLRGPRGGLILC
KDKYAQVLNKNIFPGIQGGPLEHIIAAKAVCFKEALDPSFKTYGENVVENCKELAEQLIA
RGFKIVSGGTDNHVFLVDLNNKDITGKEAEALLDSVGITVNKNTVPNETRSPFVTSGIRI
GTAAITTRGFVKDDMAEIAAVISEAIEKRDGDLSALKTRIETLCDKHPLYN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaaaatatacaaagagaagataaagaaatttatgatttaattgagaaagag
ctagttagacaacaaaaaggaatagaattaatagcttcagaaaatattgtaagtccggct
gttatggaagctatgggctcttatttaactaataaatatgctgagggatatccaaataaa
agatattatggaggatgtcacgttgtagatgaaatagaacaaattgcaattgatagagct
aaggaattatttggggcagagcatgctaatgttcaacctcattcaggttcacaagctaat
atggctgtatattttgcagtattagaaccaggagatactgtattgggtatggatttgagc
catggtgggcatttaactcatggttctccagttaatttttcaggaaaattgtttaacttt
gtatcttatggagttgataaagaaactgagatgattgactatgaaaatgtaagaaagcta
gctattgaaaataagccaaagcttatagttgctggtgcaagcgcatatgcaagaatttta
gattttccaaagtttagagaaatagctgatgaagttggtgcattattaatggtagatatg
gctcatattgcaggacttgttgctgcaggtgttcatccatcaccagtgccatattctgat
tttgtaacaacaacaactcataagactttaagaggtccaagaggtgggttaatactttgt
aaagataaatatgctcaagtattaaataaaaacatatttccaggaatacaaggaggtcct
ttagagcatattatagctgctaaggctgtttgttttaaagaagcattagatccaagtttt
aaaacatatggagaaaatgtagttgaaaactgtaaagaacttgcagaacaattaatagct
agaggttttaaaattgtatcaggtggaacagataaccatgtattcttagttgatttaaat
aacaaagacataacaggaaaagaagcagaagctttattagattctgttggaataactgtt
aataaaaacacagtacctaatgaaacaagaagtccatttgtaacttcaggaatcagaatt
ggtacagcagcgataacaactagaggttttgtaaaggatgatatggctgaaattgcagca
gttatatcagaggcaatagagaagagagatggagatttatcagctcttaagactagaata
gaaactttatgtgataaacatccattatataattaa
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