Clostridium sp. MF28: AXY43_25200
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Entry
AXY43_25200 CDS
T11014
Name
(GenBank) ABC transporter
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
clom Clostridium sp. MF28
Pathway
clom02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clom00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AXY43_25200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clom02000
]
AXY43_25200
Transporters [BR:
clom02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
AXY43_25200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
ABC_membrane_2
AAA
ABC_membrane_3
RsgA_GTPase
AAA_23
nSTAND3
AAA_29
MMR_HSR1
TsaE
AAA_16
AAA_14
DUF87
AAA_30
AAA_28
SRP54
AAA_18
AAA_25
NTPase_1
DO-GTPase2
AAA_33
Rad17
NACHT
cobW
NB-ARC
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AVK51052
LinkDB
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Position
5784732..5786660
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AA seq
642 aa
AA seq
DB search
MSENRNRVNKRSGGGFGGGPMGSFAGPKVKAKDFKGTLKRLLNYLKPQRMNFILVFIFAI
ASTIFNIVGPKISGKAITRLVEGLVGKFTVMSQNAALLKAGKPGNIPVPGIDFQYIGDIL
LLLLGLYVISTLFGFLQQYIMAGVAQKTVYNLRKEVEDKISRLPLKFFDSRTHGEILSRV
TNDVDNISTTLQQSLTQLITSIVTIVGVIIMMLTISPMMTLVVILTLPLYIVITTLVAKH
SQKFFAAQQKEVGELNGHVEEMYTGHKIVKVFGHEKDSIKEFENINDRLYKAGWKAQFIS
GIIMPMMRFVSNIGYVIVCVVGGYLATLGKISIGDIQAFIQYSNQFTQPIVQTANIANII
QSTVASAERVFELLDEVEEISDTADAKIIEFPKGEVKFDNVDFSYKPEEPLIENMNLDVK
QGHTIAIVGPTGAGKTTLVNLLMRFYEINSGKIMIDGVDIRDIKRGALHNMFGMVLQDTW
LFNGTIMDNIAYGREGATEEEVIQAAKAAHAHHFIKTLPDGYNTILNEEASNISQGQKQL
LTIARAILANPTIMILDEATSSVDSRTEVYIQKAMTELMKGRTSFVIAHRLSTIRDAELI
LVMNKGSIIEMGNHNELLAKKGFYADLYNSQFSGANLDSEVM
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaatcgtaatagagtaaataaaagatcaggtggcggttttggcggtggtcca
atgggatcttttgctggcccaaaagtaaaagctaaggattttaaagggacattaaaaaga
cttttaaattatttgaaaccacaaagaatgaatttcattttagtttttatatttgctata
gcgagtactatatttaatatagtaggacctaaaatttcaggtaaagctataactagatta
gttgaaggattagtaggaaaatttactgtaatgtctcaaaatgctgcattacttaaagca
ggaaaaccaggtaatataccagtgcctgggattgattttcaatatataggagatattctt
ttattactacttggcttatatgtaatcagtacactttttggcttccttcaacaatatatt
atggcaggggttgctcaaaaaacagtatacaacctaagaaaagaagttgaagataaaatt
tcacgtttaccgcttaaattctttgattcaagaactcatggtgaaattttaagccgtgta
acaaatgatgttgataatatttcaacaacacttcaacaaagtttgactcagcttattaca
tctatagtaactattgttggtgttattatcatgatgttaactataagtccaatgatgaca
ttagtagtaatattaacattaccactttatattgtaataacaacacttgttgctaagcat
tctcaaaagttttttgctgctcaacaaaaagaagtaggagaacttaatggtcatgtagag
gagatgtatacaggacataaaatagttaaggtttttggacatgaaaaagattcaataaaa
gagtttgaaaatattaatgatagactttataaagctggatggaaagcacaatttatatca
ggtataataatgccaatgatgagatttgttagtaatataggttatgtaatagtttgtgtt
gtaggtggatatttggcaacactcggaaaaattagtattggtgatattcaagctttcata
caatactcaaaccaatttacacagccaatagttcaaactgctaatattgctaatataatt
caatcaacagttgcatctgcagaaagggtttttgaacttttagatgaagttgaggagatt
tcagatactgctgatgctaagattatagaattccctaaaggtgaagttaaatttgataat
gttgattttagctataaaccagaagaaccacttattgagaacatgaaccttgatgttaaa
caaggtcatacaattgcaattgtaggaccgactggagcaggtaaaactacactcgttaac
ttacttatgcgtttctacgaaataaattctggtaagataatgatcgatggtgtagatatc
agagatataaaaagaggtgcacttcataatatgtttggtatggttcttcaagatacatgg
ttatttaacggaactataatggataacatagcttatggcagagaaggtgctactgaggaa
gaagttatccaggcagcaaaagcagcacatgctcatcactttattaaaactcttccagat
ggatataatacaatattaaacgaagaagcttctaatatatctcaaggccagaagcagctt
cttacaatagctagagcaattctagcaaatcctactataatgattcttgatgaggctaca
agtagtgttgactcaagaacagaggtttatatacaaaaagctatgacagaacttatgaaa
ggcagaacaagttttgttattgcacataggctttctacaattagggatgcagaattaatt
ctagttatgaataagggaagtatcatagaaatgggcaaccataatgaacttcttgcaaag
aaaggtttctatgcagatctttacaacagccaattttcaggagcaaatttagatagtgaa
gtaatgtaa
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