Condylostylus longicornis: 129606676
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Entry
129606676 CDS
T09756
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
clon
Condylostylus longicornis
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clon03009
]
129606676
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129606676
Ribosome biogenesis [BR:
clon03009
]
Eukaryotic type
Pre-60S particles
Helicases
129606676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Phage_YunG-like
AAA_30
RPT
AAA_19
Motif
Other DBs
NCBI-GeneID:
129606676
NCBI-ProteinID:
XP_055373083
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MSEENEESINFHQMELDERILKAIANLGWLTPTLIQEKAIPLLLEGKDVLVRARTGSGKT
AAFSIPVIQKILNSKNAATEQCTTALILAPSKELCQQITSVLQDLTSKCGKIVRSIDLSG
NIDLLAQKHLLSERPDIIVSTPSKILNQLQNQNVELKRGFETLVIDEADLVFSFGFENDL
KKVLDFLPPMYQAILSSATLSEDVVNLKNLVLHNPVTLKLEEPEMAPASQLSHYHILAEE
NDKAAILYALFKLHLIRGKCIIFVNTVDRCYKLKLFLEQFSIKAVILNSELPAKIRIHSV
NQFNQGIYDIIIASDEKALENPDTNGVKRATGSKRKSDKESGVARGIDFQFVSNVINFDF
PLDTSSYVHRAGRTARGTNSGTVLSFVSVKEKNLHDSTEEYLRIGYVTDDEVMKKYQFKL
EEVEPFRYRAKDAWRAITKVAVQEARLKEIKIEMFNSEKLKGFFQDNPRDLQVLRHDKPL
KTVKVQQHLSHVPDYIVPEPLKRLSGISKLTKSKKPYEIKSRSKAIYEAKKNNPLLVAEV
DFAKKRKRF
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaacgaggaatccattaattttcatcaaatggaattagatgaaagaatc
ctaaaggcaatagcaaatttaggatggctaaccccaacgcttatccaggagaaagcaata
ccgctgttgttagaaggaaaagatgtacttgttcgagctcgaaccggttctggaaaaact
gctgccttttctataccagtaatacaaaaaattttaaattcgaaaaacgcagctacagaa
cagtgtactacagcattgattttagctccaagtaaagaattatgtcaacaaataacaagt
gttttacaagatcttacatcaaaatgtggcaaaattgtaagaagtatagatttgtcggga
aatatagatttattagcgcagaaacatcttttatcagaacgaccagatattatagtatca
accccatcaaaaattttaaatcaattacaaaatcaaaatgtggaattgaaaagagggttt
gaaactttagttatagatgaagctgatttagtattttcatttggatttgagaatgattta
aaaaaagttttagatttcttaccacctatgtatcaggcaattttgtcttccgccacttta
agtgaagatgtagtaaatttaaaaaatttagttttacataatcctgttactttgaaatta
gaagaaccagaaatggctcccgccagtcaactatcacattaccacattttagccgaggaa
aatgacaaagctgccattttatatgctttattcaaactacatttgattagaggaaaatgc
ataatttttgttaatactgtggacagatgttataaacttaaactttttcttgaacaattc
agtataaaagccgttatattaaattcagaacttcctgcaaaaattcgaattcattcagtt
aatcagtttaatcaagggatatatgatattattattgcgtcagatgaaaaagctttagaa
aatccagatacaaacggtgtgaaaagggcaacaggaagcaagaggaaatcagataaagag
tctggagtcgcacgtggaattgattttcaatttgtttcaaacgtaattaattttgatttt
cctctagatacaagctcatatgttcacagagctggaagaacagcccgagggacaaacagc
ggtacggttctttcatttgttagtgttaaagagaaaaatttgcatgattcaaccgaagaa
tatctgcgtatcggttatgtaacagatgatgaagttatgaaaaaataccaattcaaactt
gaagaagtagaaccatttcgatatagagcaaaagatgcgtggcgtgcgataactaaagtt
gctgttcaggaagctagattaaaagaaattaaaattgaaatgtttaatagtgaaaaatta
aaaggtttctttcaagataatccacgcgatttgcaagttttacgtcacgataaaccattg
aaaactgtaaaagttcaacagcatttgtcacatgtacccgattacattgtaccagaacct
ttaaaaagattgtctggtatatccaaattaacaaaaagtaaaaaaccatacgaaattaaa
tcaagatctaaagccatttacgaagcgaaaaaaaataatccgttactggtagctgaagta
gattttgccaaaaaaaggaagcgattttag
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