Condylostylus longicornis: 129606798
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Entry
129606798 CDS
T09756
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
clon
Condylostylus longicornis
Pathway
clon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129606798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clon03400
]
129606798
DNA repair and recombination proteins [BR:
clon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129606798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Adenylsucc_synt
Motif
Other DBs
NCBI-GeneID:
129606798
NCBI-ProteinID:
XP_055373333
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MSKRKSEVQGTPNTLFKYFSKNLSPAVKDEEKKKKLIFEKTESNNKPIENGTPDSPLNDS
LTESFKGFPKTEDKIDMDISEDVTENGKIEVASSIKRLKDESEQESDSEEDIPKAKKKRR
RIIQVSDSESGNENDSDHANVIQKQSKKEKKPKLENDDKNLSVSEKLSKITNSSEDNTKI
MEKIEKSINEQVEKYELDQEVVYKHQTFDFLKPDKIKDKKGRRPDHPEYDPKTLYVPESF
LNQQTPGLRQWWDIKSNHFDCVLFFKVGKFYEFYHMDAEVGVKELNCIYMKGDFAHSGFP
EVSYDKMSSILIKKGYRVARIEQTETPDMMNERIKKQTKTTKFDKVVKREICQISNKGTQ
IFGSQCRVAPYYQPNYMLAICETSLDNHSEYGICFVDTTIGEFTIGQFKDDKNCSRILTL
ISHNPPVFVLYERNGISSKTQEIFKSALGNVMKESLLSKTQFWEAEKTLKFLAEDYYSKE
ETAWPAVLKLMQDENDHLGLTPKEPFKLALRSLGAIIYYLKNGVIDQQVLGMAQYSLYTP
PDILANAQELKDLINETKINTDKLNMKKSNMVLDAITLANLRIVNSEHSLLTSLDFCCTK
FGKRLLHNWLCAPSCDISIIKERQNAIRELLDNGEILQEIRNIFKTLPDFERHLAQLYGF
SNGKRLQNHPDGRAILFEEQQYNKRKIQNFVQLIKGFEKIMAIPKIFSSFESSLIKRLTQ
HEPIGIFPEYKEVISYFNNSFDHEAAIKSGVVAPEKGLDAEYDSVENLIEDIKAELKEYL
TEQEKTFKCRINYFGTDKKRYQLEIPDSHNHKVPKSYMLESQKKGFKRYHTNETKAFLKR
MTQAEDKKNAVLKDLARRIYEKFTNHFDMWKQCVESTAIIDVLSSLAEYAKNQTNICTPE
LIEPESDPIIDIEDGFHPCIPSSNYIPNGIMIGGDSAPLALLTGPNMGGKSTLMREIGLL
TIMAQIGCLVPAEKCKLSVVDRIFTRLGAQDDIISGHSTFLVELNETSAILKHATVNSLV
LLDELGRGTATYDGTAIAASVVQFLSDLKCRTIFSTHYHSLVEYFHNNPNVYMGHMACMV
ENESNDDPTEETVTFLYKYTSGACPKSYGFNAAKLAGMPRPIIRRAFELSKKVESLSLEQ
KIMSKILCDSDDHQILNLLTDLKTCQIK
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaggaaaagtgaggttcaaggtacaccaaacactttatttaaatatttttca
aaaaatttatctccggctgtaaaagatgaagaaaagaaaaagaaacttatttttgagaaa
accgaatccaataataaaccaattgaaaatggtacacctgatagccctttgaacgattcc
ttaactgaatcgttcaaaggatttccaaaaaccgaagataaaatagatatggacatatcg
gaagatgttaccgaaaacggtaaaattgaagttgcaagttctattaaacgactaaaagat
gaaagtgaacaagaatctgattcagaagaggatattccgaaagctaagaaaaaaagaaga
agaattattcaagtgtctgactcagaatctggaaatgagaatgatagtgatcatgctaat
gttattcaaaagcaatcgaaaaaggaaaaaaaacctaaattagaaaatgatgacaaaaac
ctttcagtttctgaaaaactttcaaaaattacaaactcttcagaagataacactaaaata
atggaaaaaattgaaaaatcaatcaatgagcaagtagaaaaatatgaactagatcaagaa
gttgtatacaagcatcaaacgttcgatttcctaaagccggacaaaattaaagataaaaaa
ggacgtcgtcctgatcatccagaatatgatccaaaaactttatatgttccagaatcattt
ttaaatcaacaaacacctggtctacgacaatggtgggatattaaatccaatcatttcgat
tgtgttttatttttcaaagttggaaaattttatgaattttatcatatggatgcggaagtt
ggagttaaagaattgaattgcatttacatgaaaggagactttgctcattccggattcccc
gaagtatcttatgataaaatgtcaagtattttgattaaaaaaggctatagagttgcaaga
attgagcaaacagaaactccagatatgatgaatgaacgaataaaaaaacaaactaagact
acgaaatttgataaagtagttaaacgtgaaatatgtcaaatatcaaataaaggaacacaa
atttttggttcacaatgcagggtagcaccatattatcagcccaattatatgttggctata
tgtgaaacttcattggataatcacagtgaatacggaatttgttttgttgatacaacaatt
ggcgaattcacaataggtcaattcaaagatgacaaaaattgttctcgaatcttaacttta
atttctcacaatcctccggtatttgttttgtatgaaagaaatgggatctcaagtaaaaca
caagaaatttttaaatcagccctaggtaacgtgatgaaagaaagtttgttaagcaaaaca
cagttctgggaagctgaaaaaacattaaaatttttagctgaagattattattctaaagaa
gaaaccgcatggccagcagttttaaaattgatgcaagatgaaaatgatcacttaggcctt
actccaaaagaaccatttaaattggctttaagatctttgggagcgattatctattactta
aaaaatggtgttatagaccaacaagtacttggaatggcacagtattcattatacactcca
cccgacatattggccaatgctcaagaattaaaagatttgattaatgagactaaaataaat
acagacaagttaaatatgaagaaaagtaatatggttttagacgctatcactttggcaaac
cttagaatagtcaatagtgagcattctttacttacctcgttagatttttgctgtaccaaa
tttggaaaaagactactgcataactggttatgtgctccaagttgtgatataagtattata
aaagaaagacaaaatgcaattagagagttgctagacaacggtgaaatattacaagaaatt
cgaaatatatttaagacattaccagattttgaacgacatctggctcaactttatggtttt
agcaacggaaagagattgcaaaatcaccctgatggaagagctattttatttgaagaacaa
cagtacaataaaagaaaaattcagaattttgttcaattaatcaaaggttttgagaaaata
atggctattccaaaaattttctctagttttgagtccagtttaataaaaaggttaacacaa
catgaaccaattggcattttcccggaatataaagaagtgatttcctattttaataattca
tttgatcatgaagccgcaataaaatcaggagttgtggcgcctgaaaagggtttggatgcc
gaatatgattctgtagaaaatctcattgaagatattaaagctgaacttaaagaatatcta
actgaacaagaaaaaacttttaaatgccgaattaattactttggaacggataaaaaacgt
tatcaattagaaattcctgatagtcataatcataaagttcctaaatcttacatgttggaa
agtcagaaaaaaggtttcaaaagatatcacacaaatgaaacaaaggcatttttgaaacga
atgactcaagctgaagataaaaaaaatgctgtactaaaagatttagctcgtcgcatttat
gaaaagtttacaaaccattttgatatgtggaagcaatgcgttgaatcaaccgccatcata
gatgttttgtcttctttagccgagtatgctaaaaatcaaacaaacatttgcactcctgaa
cttatagaacctgaatctgatccaataatagatattgaagatggttttcatccttgtata
ccctcatctaattatataccaaatggaattatgattggtggagattctgcacctttagca
cttttaaccggtcctaatatgggtggtaaaagtacattaatgcgagaaattggtcttcta
acaattatggcacaaataggttgtcttgtcccagctgaaaagtgtaaattatctgttgtt
gatagaatttttacacgattaggagcccaagatgatataatatctgggcacagtacattt
ctggtagaattaaatgaaacttcggctatcctaaaacatgctaccgtaaatagcttagtt
ttattagatgaattaggtcgtggaactgcaacttatgatggtacagccatagcagctagt
gtcgtccaatttctatctgatttaaaatgccgaacgatattttcaactcattatcatagc
ttagttgaatattttcataataatccgaatgtgtacatgggtcatatggcttgtatggtt
gaaaatgaatcaaatgacgatccaaccgaagaaactgtaacattcctatataaatataca
agtggagcttgtccaaaatcatatggttttaatgctgccaaattagctggaatgcctcgt
ccaattataagaagagcatttgagttatcaaaaaaagtcgaatctctatcacttgaacaa
aaaatcatgtccaaaattttatgtgattcagatgaccatcaaatattaaatttacttaca
gatttaaaaacatgccaaattaaataa
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