Condylostylus longicornis: 129607843
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Entry
129607843 CDS
T09756
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
clon
Condylostylus longicornis
Pathway
clon03013
Nucleocytoplasmic transport
clon03015
mRNA surveillance pathway
clon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129607843
09122 Translation
03013 Nucleocytoplasmic transport
129607843
03015 mRNA surveillance pathway
129607843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clon03019
]
129607843
03041 Spliceosome [BR:
clon03041
]
129607843
03009 Ribosome biogenesis [BR:
clon03009
]
129607843
03012 Translation factors [BR:
clon03012
]
129607843
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129607843
Messenger RNA biogenesis [BR:
clon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129607843
mRNA cycle factors
Stress granule specific factors
129607843
Spliceosome [BR:
clon03041
]
Complex C
Other components
EJC/TREX
129607843
Ribosome biogenesis [BR:
clon03009
]
Eukaryotic type
90S particles
Helicases
129607843
Translation factors [BR:
clon03012
]
Eukaryotic type
Initiation factors
eIF-4
129607843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Cas3-like_C_2
TniB
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
129607843
NCBI-ProteinID:
XP_055375022
LinkDB
All DBs
Position
Unknown
AA seq
401 aa
AA seq
DB search
MSRRGGGPQGEDLSNVEFETSEDVEVIPTFHSMQLKEELLRGIYAYGFEKPSAIQQRSII
PIVKGRDVIAQAQSGTGKTATFSIAILQQLDTTLRETQVLCLSPTRELAVQIQKVILALG
DFMNVQCHVCIGGTNLGEDIRKLDYGQHIVSGTPGRVYDMIKRRVLRTRAIKMLVLDEAD
EMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLEG
IKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD
MPQKERDDIMKDFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGR
FGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtctagacgcggaggtggacctcaaggagaggatttatctaatgttgaatttgaaaca
agtgaagatgtggaagtaataccaacgtttcattctatgcaactcaaggaagagttgctt
cgcggaatatacgcatatggtttcgaaaaaccctctgctattcaacaaaggagtattatc
cctattgtgaaaggaagagacgtaattgcacaagctcaatctggtactggaaaaactgca
acattttcgatagctattttgcagcaacttgatacaactttacgtgaaacacaagtgtta
tgtttgtcacctaccagagaattggcagtacaaatacaaaaagttatattagctttggga
gactttatgaatgtacaatgtcacgtttgtatcggcggcacaaatttaggtgaagatatt
cgcaaacttgactatggtcaacatattgtaagtggaacaccaggacgagtatacgatatg
attaaacgacgtgttttgcgcactagggcaattaagatgttagttttagatgaagctgat
gaaatgttaaacaaaggctttaaagaacaaatttacgatgtatatcgatatttaccccct
gcaacacaggttgtacttatatcagctactttgccccatgaaattttagagatgacttct
aaatttatgacagacccaatcagaatattggttaaacgtgatgagttgaccttggaaggt
attaagcaattctttgttgctgttgaacgagaagaatggaaattcgatacgctatgtgac
ttgtatgatacacttactataactcaagctgtaatattctgtaacacgaaaagaaaggtg
gattggctaacagaaaaaatgcgcgaagcgaattttacagtaagttcgatgcatggcgac
atgccacaaaaagaacgtgacgatattatgaaagattttcgttctggtcaaagtcgtgta
ctaataactacagatgtgtgggcgagaggtatcgatgtacagcaagtatctttagtcatt
aattatgatttaccaaataatcgtgagttatatattcatcgtattggtcgttctggcaga
tttgggagaaaaggtgttgcaattaattttgttaaatcggacgatattcgaattttgcgt
gatattgagcaatattactctacgcagattgacgagatgccaatgaatgttgctgattta
atttaa
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integrated database retrieval system
