KEGG   Condylostylus longicornis: 129607923
Entry
129607923         CDS       T09756                                 
Name
(RefSeq) chromatin assembly factor 1 p55 subunit
  KO
K10752  histone-binding protein RBBP4
Organism
clon  Condylostylus longicornis
Pathway
clon03082  ATP-dependent chromatin remodeling
clon03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:clon00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129607923
   03083 Polycomb repressive complex
    129607923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clon03036]
    129607923
Chromosome and associated proteins [BR:clon03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     129607923
  Histone modification proteins
   HAT complexes
    HATB complex
     129607923
   HDAC complexes
    Sin3A-HDAC complex
     129607923
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     129607923
    PRC2.2
     129607923
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     129607923
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129607923
  Chromatin remodeling factors
   NuRD complex
    129607923
   NuRF complex
    129607923
   NuRF complex (fruit fly)
    129607923
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_WDHD1_1st EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_EML WD_LRWD1 Beta-prop_WDR90_POC16_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_DCAF12 ANAPC4_WD40 eIF2A Beta-prop_RIG_1st WD40_MABP1-WDR62_1st Beta-prop_SPT8 NBCH_WD40 MIOS_WD40 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 129607923
NCBI-ProteinID: XP_055375157
LinkDB
Position
Unknown
AA seq 430 aa
MGDRGDNAEAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQE
GKDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEI
EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQ
KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHL
LHESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT
VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAE
DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPEIP
SSELEGSGAA
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgggcgatagaggagataatgccgaagcatttgatgatgctgtagaagaacgtgtaata
aacgaagaatacaaaatatggaagaaaaatacaccatttttatatgatttggtaatgaca
catgctttagaatggccatcacttactgcacaatggttacctgacgttacaaaacaggaa
ggcaaagattattctgtgcatcgtcttatattagggacgcatacttctgatgagcaaaac
cacttattaattgctagtgtgcaactaccaaatgaagatgcacaatttgatgcttctcac
tatgacaacgaaaaaggtgagtttggtggatttggatctgtttccggaaaaattgaaatt
gaaattaaaatcaatcatgagggagaagtaaatcgtgcacgttatatgcctcagaacgct
tgtgttattgcaactaaaacgccttctagcgatgtactagtatttgactatacaaaacac
cccagcaaaccagaaccaagcggagaatgtcatccagatcttcgcttaaggggtcatcaa
aaagaagggtatggcctatcatggaatccaaatttaaatggatatttattatcagctagt
gatgatcatacaatttgcttgtgggatattaacgcaacaccaaaagaacatcgggtaatt
gacgctaaaaatatttttactggtcatacagctgtcgtggaagatgtagcttggcatcta
cttcatgaatctttatttggttctgttgctgacgatcaaaaacttatgatttgggacaca
cgttgtaataacacatccaaaccttcacatacagtagacgctcacacagctgaagtcaat
tgtttaagttttaacccttattctgaatttattttggccactggttcagcagataaaact
gtcgccttatgggatttaagaaatcttaaactaaaactacattccttcgaatcacataaa
gatgaaatatttcaagttcaatggtcacctcataacgaaacaattttagcatcttctgga
actgatcgacgtttgcatgtatgggacttatcaaaaataggtgaagaacaaagtgcagaa
gatgccgaagatggaccgccagagcttttatttattcatggaggacacacagcaaaaata
tcagacttctcttggaatccaaatgaaccatgggtaatttgttcagtttcggaagataat
ataatgcaagtatggcaaatggcagaaaatatatataatgatgaagaaccagaaatccca
tcatctgagttagaaggtagtggtgccgcgtaa

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