KEGG   Condylostylus longicornis: 129608315
Entry
129608315         CDS       T09756                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
clon  Condylostylus longicornis
Pathway
clon03013  Nucleocytoplasmic transport
clon03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clon00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    129608315
  09122 Translation
   03013 Nucleocytoplasmic transport
    129608315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clon03019]
    129608315
   03041 Spliceosome [BR:clon03041]
    129608315
Messenger RNA biogenesis [BR:clon03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     129608315
Spliceosome [BR:clon03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    129608315
SSDB
Motif
Pfam: WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML EIF3I Beta-prop_WDR5 Beta-prop_WDR36-Utp21_1st Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_ACSF4 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR41 Beta-prop_TEP1_2nd Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 129608315
NCBI-ProteinID: XP_055375740
LinkDB
Position
Unknown
AA seq 311 aa
MVSDKLKVLYNTVLSQTISSDGKWMFYGNNYGDLFVQNLSEGCETADTECYSLNLGPILS
LLFYKDLILVGTDSLISAYKWLNEKVEVNKTYFQIEISGCGDINCILSDDSNDSIFIGCG
NNSIYQICVKSKTILFEFKGHTNYIHCIQLYEINLYSAAEDGQIICWDINTKQILKKIKP
YKEQKLYRPEFGNWQGSVAVYNDWLICGGGTQASLWHLPSSEMIQAFPFPGKIHYCDFID
ETVMIAGESKNILYYALNGEEVGKIESDLPAIYNVTYCKKLNYMAISGAGNKVINMNDIR
YIDYYKDLYKY
NT seq 936 nt   +upstreamnt  +downstreamnt
atggtatcggataagttaaaggtactttacaatacggttctatctcaaacaatttcttcc
gatgggaaatggatgttttacggaaataattacggagatctgtttgtacaaaatttaagt
gagggatgtgagactgcagatactgaatgctattctttaaatcttggaccaatactgagt
ttattattttataaagacttaattttagttggaacagattccttaatatctgcgtataaa
tggctaaatgaaaaggtagaagtcaacaaaacatattttcaaatagaaattagtggttgc
ggcgatatcaattgtattttgtcagacgattctaatgacagcatatttattggatgtggg
aataatagcatttaccagatatgtgtaaaatcaaaaactattttgttcgaattcaaagga
cacactaattacattcattgtattcagttatatgaaataaatttgtattctgctgctgaa
gatggtcaaataatttgttgggacataaatactaaacagattctgaagaaaattaaacca
tataaagagcaaaaattatacagaccagaatttgggaattggcaagggagtgttgccgta
tataacgactggctaatatgcggaggcggaacgcaggcttcgctttggcatttaccttct
tccgaaatgattcaagctttcccgttccctggaaaaatacattattgtgattttatagat
gaaactgtaatgatagctggcgagtcaaaaaatattttatactatgctttaaatggagaa
gaggttggaaaaattgaaagtgatttgccagccatttacaatgtgacgtattgtaaaaaa
ttaaattacatggccatatccggagctggcaataaagttataaatatgaatgacattagg
tacatagattattacaaggatttatataaatattaa

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