Condylostylus longicornis: 129608708
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Entry
129608708 CDS
T09756
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
clon
Condylostylus longicornis
Pathway
clon03013
Nucleocytoplasmic transport
clon03015
mRNA surveillance pathway
clon03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129608708
09122 Translation
03013 Nucleocytoplasmic transport
129608708
03015 mRNA surveillance pathway
129608708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clon03019
]
129608708
03041 Spliceosome [BR:
clon03041
]
129608708
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129608708
Messenger RNA biogenesis [BR:
clon03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129608708
Spliceosome [BR:
clon03041
]
Complex C
Other components
EJC/TREX
129608708
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129608708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
129608708
NCBI-ProteinID:
XP_055376349
LinkDB
All DBs
Position
Unknown
AA seq
423 aa
AA seq
DB search
MADNDDLLDYEDEEQTETQVTETQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCG
FEHPSEVQHECIPQAVLAMDILCQAKSGMGKTAVFVLATLQQLEPTENHTYVLVMCHTRE
LAFQISKEYERFSKYMPNIKVGVFFGGLPIQKDEETLKNMVPHIVVGTPGRILALIRNKK
LNLKHLKHFILDECDKMLEQLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKFMQ
DPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALA
QLLTEQNFPAIGIHRGMNQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDM
PEDSDTYLHRVARAGRFGTKGLAITFVSEESDAKTLNEVQDRFDVNITELPDEIDLSSYI
EGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggctgataatgatgaccttttggattatgaagatgaagagcaaactgaaacgcaagta
acggaaacacaagaagccccaaaaaaagatgttaaaggaacatatgtatcaattcatagc
tcagggtttagggatttcttgcttaaaccagagatattaagagctattgttgattgcggt
tttgaacatccatcggaagttcaacatgaatgtattcctcaagctgttctagcgatggat
attttgtgtcaagcaaaatcaggtatgggcaaaacagcagtttttgtattagccacattg
caacaattagagcccactgaaaatcatacttatgtattagtaatgtgtcatacaagagaa
cttgcattccaaattagtaaagaatatgaaagattttcgaaatatatgccaaacattaag
gttggtgttttcttcggtggtctaccaatacaaaaggacgaagaaaccttaaaaaacatg
gtaccacatattgttgtcggaactccaggtagaattttggccctaatccgcaataaaaaa
cttaatctcaaacatttgaaacattttattcttgatgaatgtgataaaatgttggagcaa
ttggatatgcgacgtgatgtacaagaaattttccgcaatacaccacatggaaaacaagtt
atgatgttttctgctacactgagtaaggaaatccgcccggtctgcaaaaaatttatgcaa
gatccaatggaggtttatgttgatgatgaagcaaaactaactttacatggtttacagcag
cattacgttaaactgaaagaaaatgaaaaaaataaaaaactatttgagcttcttgatgtc
ttggaatttaatcaagttgttatatttgtaaaatctgttcaacgttgtatggcgttagca
cagcttttaactgaacaaaattttcctgctattggaattcatagaggaatgaatcaggaa
gaacgtttatcaagatatcaacagtttaaagatttccaaaagcgtattttagtggcaact
aatttatttggacgtggaatggatattgaacgtgtcaatattgtttttaattatgatatg
ccagaagattctgacacttatttacatagagttgcaagagcaggtcgatttggtaccaaa
ggtttagccattactttcgtgtcagaagaatcagatgcaaaaacactaaatgaagttcaa
gatagatttgacgttaatattacagaattacctgacgaaattgatttatcatcttatatt
gaaggacgatag
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