Condylostylus longicornis: 129609044
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Entry
129609044 CDS
T09756
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
clon
Condylostylus longicornis
Brite
KEGG Orthology (KO) [BR:
clon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clon03041
]
129609044
03016 Transfer RNA biogenesis [BR:
clon03016
]
129609044
Enzymes [BR:
clon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129609044
Spliceosome [BR:
clon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129609044
Transfer RNA biogenesis [BR:
clon03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
129609044
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
129609044
NCBI-ProteinID:
XP_055376873
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MTAFEEFGVLPEIAKAVDEMEWNLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
VQIAWETIRDIMEGKETKSNSQGAIVPWTMSFFDRSSALAVTPDGLRCQSREFKEWHGCR
STTGVQGSGKYYFESVVTDEGLCRVGWATTQAKLDLGTCKYGFGFGGTGKKSNNKQFDDY
GEAFGMQDAIGCCLDLDNFEIRYTKNGVDLGTAFRIERNLQKEAFYPAVVLKNAEMSFNF
GKTEFKYPPPKGYVAICNGEQRNVKINPLASSTAKSEDNKIKPNAPQAIIIEPSRELAEQ
TCNQITKFKKHLKDPALKELLLIGGVNVKDQLAQLQSGVDIIVATPGRLEDLIGGGHVSL
THCRFFVLDEADGLLKQGYTDLIDRLHKQIPKITSDGRRLQMIVCSATLHSFEVKKLAER
LMYFPTWVDLKGEDAVPETVHHVVVKVDPQVDLLWQNLRQHVQTDGVHAKDDVRPGVRTP
EAFSEAVKLLKGEYCIRAIEEHKMDRAIIFCRTKLDCDNLERYLKQRGGNKYSCVCLHGD
RKPNERKANLEKFKRKEVKFLICTDVAARGLDITGLPYMINITLPDEKSNYVHRIGRVGR
AERMGLAISFVSTVPEKVWYHGEWCASRGRNCWNTNLTDNGGCCIWYKEKNYLADIEEHL
NVTIQQVDTDIKVPANEFDGKVVYGQKLSNNQSNYQTHVDQLKPAVMKLSELELKAQTLF
LKHAGF
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacagccttcgaagaatttggtgtactccctgaaatcgctaaagctgtagatgaaatg
gagtggaatttgccaacagatgttcaagccgaagcaataccacttatattaggtggaggc
gatgttttaatggccgctgaaactggatctgggaaaactggagcattttgtttaccaatt
gtgcaaatagcatgggaaactatacgcgatataatggaaggaaaggaaacaaaatcaaat
tcgcaaggtgctatagtaccgtggactatgtcattttttgatcgaagtagtgctttagct
gtaacgccagatgggttgagatgtcaatctagagaattcaaggaatggcatggatgccgt
tctaccactggagttcagggatctggaaaatattattttgagtctgttgttacagatgaa
ggcctttgccgtgttggctgggctactacacaagctaaattggatttgggaacttgtaaa
tacggttttggatttggaggtacagggaaaaaatccaacaacaaacaatttgatgattat
ggagaagcttttggtatgcaagatgccattggatgttgtctagacttagacaattttgaa
atccgatatacaaaaaacggtgttgatttaggtacagcctttcgtattgaaagaaattta
caaaaggaagctttttatccagctgttgttttaaaaaatgctgagatgtcattcaatttc
ggaaagactgaatttaaatatcctcccccaaaaggttacgtggctatttgtaacggtgag
caacgaaacgtgaaaataaatccacttgcttcatcgactgccaaaagtgaagacaataaa
atcaagccaaatgctcctcaagcaattattattgaaccaagtcgtgaattagctgaacaa
acttgcaatcaaataactaaatttaagaaacatttgaaggatcctgctttgaaagaatta
ttactaatcggtggagtaaatgtaaaagaccaattggcacaactgcaatctggagtagat
ataattgttgcgactcctggacgtttagaagatcttataggaggggggcatgtttcatta
acgcattgtcgatttttcgttttagatgaagctgacgggcttttaaagcaaggttataca
gacttgattgataggctacataaacaaatcccaaaaattacatctgatggtcgacgtctt
caaatgattgtatgttctgcaacattacatagtttcgaagtaaaaaaattagctgaaaga
ttaatgtatttccctacttgggttgatttgaaaggtgaagatgctgttccagaaactgta
catcatgtggtagtaaaagttgatccacaagttgatttgctttggcaaaatcttcgtcag
catgttcaaacagatggagtacatgcaaaagatgatgttcgtcctggggtaagaacacca
gaagctttctctgaggcagtgaaattgcttaaaggcgaatattgtattcgtgcaattgaa
gaacataaaatggatagagccattatattttgcaggacgaaattagattgcgataattta
gaaagatatcttaagcaacgtggtggtaacaaatattcttgtgtatgcttgcatggtgat
cgtaaaccgaatgaaagaaaggctaatttagagaaatttaaaagaaaagaagtgaaattt
ttgatatgcaccgatgttgcagctagaggtttagatattactggattaccctatatgatt
aatataactttgccagatgaaaaatccaattatgtgcatcgtataggtcgtgttggtcgt
gctgaacgtatgggtcttgctataagtttcgtttcgacagtaccagaaaaggtttggtat
catggagaatggtgtgcttcacgtggtcgtaattgttggaacacaaatttaactgacaac
ggcggttgttgtatttggtataaagaaaaaaattatttagctgatattgaagaacattta
aatgtcactattcaacaagttgatactgatattaaggttccggcaaatgaatttgatgga
aaagtggtatatggacaaaaactatcaaataatcaatcaaattatcaaactcacgtagat
caattgaaaccagctgtcatgaaattaagtgaattggaattgaaagcgcaaactcttttc
cttaaacatgcaggcttttaa
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